RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 LOC102723996A0A087X1L8 192 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 IGHV1-45A0A0A0MS14 117 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 IGHV3-20A0A0C4DH32 117 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 A0A1W2PQD3 144 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 A0A1W2PS29 197 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 GXYLT2A0PJZ3 443 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CDC14CA4D256 554 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 SERINC4A6NH21 518 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR6C70A6NIJ9 312 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CPSF4LA6NMK7 179 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 C9orf172C9J069 976 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 H3BN98 237 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 H3BNX3 289 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 WWP2O00308 870 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 TO15178 435 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 RRP8O43159 456 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 HCRTR2O43614 444 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 HYAL3O43820 417 aaPredicted RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 KIAA0513O60268 411 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 MPZL2O60487 215 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 FCMRO60667 390 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 TPST2O60704 377 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 FMO6PO60774 539 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 PPM1BO75688 479 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR5F1O95221 314 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 UTS2O95399 124 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 DDAH2O95865 285 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 DLGAP3O95886 979 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 RECKO95980 971 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 IGKV3-11P04433 115 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 UBTFL6P0CB48 400 aaPredicted RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CT45A8P0DMV1 189 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CT45A9P0DMV2 189 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 PNMTP11086 282 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 GP1BBP13224 206 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 S1PR1P21453 382 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 IGFBP5P24593 272 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CXCR1P25024 350 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 FKBP2P26885 142 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 PEX2P28328 305 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 GTF2E2P29084 291 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 RYKP34925 604 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 ETV5P41161 510 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 YAP1P46937 504 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 NUP107P57740 925 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CDC42P60953 191 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 OC90Q02509 493 aaPredicted RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 MGAT2Q10469 447 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 COX10Q12887 443 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 DAG1Q14118 895 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 GANABQ14697 944 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 EBPQ15125 230 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF141Q15928 474 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 RSPO4Q2I0M5 234 aaPredicted RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CT45A2Q5DJT8 189 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 ENTPD8Q5MY95 495 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 MRPL2Q5T653 305 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 SLC22A10Q63ZE4 541 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF385CQ66K41 422 aaPredicted RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 WBP2NLQ6ICG8 309 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 RPL13AP3Q6NVV1 102 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF613Q6PF04 617 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CASP12Q6UXS9 341 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF517Q6ZMY9 492 aaPredicted RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 FRRS1Q6ZNA5 592 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 TMPRSS7Q7RTY8 843 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 GPR155Q7Z3F1 870 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 GALNT10Q86SR1 603 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 VRK2Q86Y07 508 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 GRAMD2AQ8IUY3 354 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 P3H2Q8IVL5 708 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 GPALPP1Q8IXQ4 340 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 RNF113BQ8IZP6 322 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 C8orf59Q8N0T1 100 aaPredicted RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 DEPDC4Q8N2C3 294 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 C10orf53Q8N6V4 93 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 TMEM102Q8N9M5 508 aaPredicted RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 FAM98AQ8NCA5 519 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR52L1Q8NGH7 329 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR5M3Q8NGP4 307 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 OR10Q1Q8NGQ4 319 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 FAM110BQ8TC76 370 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 GNPDA2Q8TDQ7 276 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 C8orf44Q96CB5 159 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 RNF31Q96EP0 1072 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 THOC3Q96J01 351 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 MPP4Q96JB8 637 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 SGCZQ96LD1 299 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CCNL2Q96S94 520 aaPredicted RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 SPSB2Q99619 263 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 SEMA4CQ9C0C4 833 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 AMBRA1Q9C0C7 1298 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 NXF5Q9H1B4 397 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 CDCP1Q9H5V8 836 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 COQ10BQ9H8M1 238 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 ZNF160Q9HCG1 818 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 VCX3AQ9NNX9 186 aa5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 PAPOLBQ9NRJ5 636 aaKnown RBP5.39□□□□□ -1.55
RNU1-88P-201ENST00000459274 IMPAD1Q9NX62 359 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms