RNA–Protein interactions for RNA: ENST00000458649.6

AMBRA1-202, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 2 BASIC

Gene AMBRA1, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-202ENST00000458649 IRS1P35568 1242 aa10.12□□□□□ -0.79
AMBRA1-202ENST00000458649 RTN4RL1Q86UN2 441 aaPredicted RBP10.12□□□□□ -0.79
AMBRA1-202ENST00000458649 OR2T33Q8NG76 320 aa10.12□□□□□ -0.79
AMBRA1-202ENST00000458649 PPP1R35Q8TAP8 253 aa10.12□□□□□ -0.79
AMBRA1-202ENST00000458649 TM9SF2Q99805 663 aa10.12□□□□□ -0.79
AMBRA1-202ENST00000458649 ATP13A2Q9NQ11 1180 aa10.12□□□□□ -0.79
AMBRA1-202ENST00000458649 EBF1Q9UH73 591 aa10.12□□□□□ -0.79
AMBRA1-202ENST00000458649 SHANK3Q9BYB0 1731 aa10.12□□□□□ -0.79
AMBRA1-202ENST00000458649 GXYLT2A0PJZ3 443 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 H0YAE9 185 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ZNF701M0R085 212 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 SIGLEC6O43699 453 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 RDH16O75452 317 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ATXN1LP0C7T5 689 aaKnown RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 C7P10643 843 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 POU3F2P20265 443 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 GCH1P30793 250 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 THBS2P35442 1172 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ALDH3B2P48448 385 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 COMMD6Q7Z4G1 85 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 POGLUT1Q8NBL1 392 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 OR6N2Q8NGY6 317 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 TWSG1Q9GZX9 223 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 C1GALT1Q9NS00 363 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 A0A0U1RQS6 177 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 A6NIZ1 184 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ZNF878C9JN71 531 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 CRTAPO75718 401 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ATE1O95260 518 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ZNF888P0CJ79 500 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 DDCP20711 480 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 HLCSP50747 726 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 HK3P52790 923 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 RAP1BP61224 184 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 RAP1AP62834 184 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 BTN1A1Q13410 526 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ZNF77Q15935 545 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 MEP1AQ16819 746 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 PIGGQ5H8A4 983 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 C19orf47Q8N9M1 422 aaKnown RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 TERB2Q8NHR7 220 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 TMEM203Q969S6 136 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 PGAM5Q96HS1 289 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 C7orf34Q96L11 122 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ZNF416Q9BWM5 594 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 CDC14CA4D256 554 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 RPP14O95059 124 aaKnown RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 PAHP00439 452 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 HTR6P50406 440 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 SRYQ05066 204 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 TRAM1Q15629 374 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 SLC25A25Q6KCM7 469 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 BPHLQ86WA6 291 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 TBC1D20Q96BZ9 403 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 OR5B12Q96R08 314 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 TBX5Q99593 518 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 AGPAT4Q9NRZ5 378 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 LHX3Q9UBR4 397 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 CERS1P27544 350 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ELP2Q6IA86 826 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ABHD11Q8NFV4 315 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 EPHX3Q9H6B9 360 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 TUBGCP6Q96RT7 1819 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 CDK5RAP2Q96SN8 1893 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ZNF705FA8MVS1 300 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 LRRN3E7EW58 273 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ATP6V1G2-DDX39BF2Z307 99 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 PTHP01270 115 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 LPLP06858 475 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ZNF705DP0CH99 300 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 ZNF705BP0CI00 300 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 RAB5CP51148 216 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 C14orf28Q4W4Y0 310 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 GLT8D1Q68CQ7 371 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 SLC27A4Q6P1M0 643 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 TMED4Q7Z7H5 227 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 TEX26Q8N6G2 289 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 PSD4Q8NDX1 1056 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 SPRYD4Q8WW59 207 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 LRRN3Q9H3W5 708 aa10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 SDR39U1Q9NRG7 319 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 CXXC1Q9P0U4 656 aaPredicted RBP10.11□□□□□ -0.79
AMBRA1-202ENST00000458649 BORCS7-ASMTA0A0B4J1R7 106 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 FAM155AB1AL88 458 aaPredicted RBP10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 GALR3O60755 368 aaPredicted RBP10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 FMO6PO60774 539 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 RFPL3O75679 317 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 DIRAS1O95057 198 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 PET100P0DJ07 73 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 C18orf21Q32NC0 220 aaPredicted RBP10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 ZNF627Q7L945 461 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 SNX29P2Q8IUI4 249 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 SLC44A3Q8N4M1 653 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 OR2T4Q8NH00 348 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 LIN37Q96GY3 246 aaPredicted RBP10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 SHISA7A6NL88 538 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 SLC33A1O00400 549 aaPredicted RBP10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 SLC19A2O60779 497 aa10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 RPS17P08708 135 aaKnown RBP10.1□□□□□ -0.79
AMBRA1-202ENST00000458649 RPL34P49207 117 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms