RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 AP3D1O14617 1153 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 HS6ST1O60243 411 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 ALOX12BO75342 701 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 JRKO75564 520 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 CCNB2O95067 398 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 H1F0P07305 194 aaKnown RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 ANXA8P13928 327 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 NID1P14543 1247 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 ENDOUP21128 410 aaKnown RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 S1PR1P21453 382 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 RPS4Y1P22090 263 aaKnown RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 SSTR4P31391 388 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 KRT20P35900 424 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 PIGAP37287 484 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 PPICP45877 212 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 OR1E2P47887 323 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 CDH12P55289 794 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 TPD52P55327 224 aaPredicted RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 RGS8P57771 180 aaPredicted RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 PPP2R2BQ00005 443 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 MERTKQ12866 999 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 GPR68Q15743 365 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 DUSP7Q16829 419 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 KIF26BQ2KJY2 2108 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 CYP27C1Q4G0S4 372 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 FLYWCH1Q4VC44 716 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 VWA2Q5GFL6 755 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 PRAMEF17Q5VTA0 474 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 AP1ARQ63HQ0 302 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 TYW3Q6IPR3 259 aaKnown RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 DEF8Q6ZN54 512 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 COX15Q7KZN9 410 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 B3GNT8Q7Z7M8 397 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 CMIPQ8IY22 773 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 ZNF615Q8N8J6 731 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 BMPERQ8N8U9 685 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 ATG16L2Q8NAA4 619 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 TOR1AIP2Q8NFQ8 470 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 GPR32P1Q8NGA4 272 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 C16orf52Q8NHV5 167 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 SLC2A12Q8TD20 617 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 GIPC3Q8TF64 312 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 APOBEC4Q8WW27 367 aaKnown RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 CYGBQ8WWM9 190 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 TSLPQ969D9 159 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 SLC35B4Q969S0 331 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 RMND5BQ96G75 393 aaPredicted RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 SENP5Q96HI0 755 aaPredicted RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 PRRC1Q96M27 445 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 SLC29A1Q99808 456 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 PSD2Q9BQI7 771 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 FNDC11Q9BVV2 318 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 DDA1Q9BW61 102 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 ANKRD60Q9BZ19 345 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 DPH1Q9BZG8 443 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 ULBP3Q9BZM4 244 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 AMBRA1Q9C0C7 1298 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 OR8D2Q9GZM6 311 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 HOXD1Q9GZZ0 328 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 ANKRD19PQ9H560 264 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 KRCC1Q9NPI7 259 aaPredicted RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 ASCL3Q9NQ33 180 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 PDP1Q9P0J1 537 aaPredicted RBP8.28□□□□□ -1.08
VPS50-207ENST00000458530 CTSFQ9UBX1 484 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 KCND3Q9UK17 655 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 CBLCQ9ULV8 474 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 TESMINQ9Y4I5 508 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 LOXL2Q9Y4K0 774 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 CLDN16Q9Y5I7 305 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 LYVE1Q9Y5Y7 322 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 U3KQV3 271 aa8.28□□□□□ -1.08
VPS50-207ENST00000458530 NBPF19A0A087WUL8 3843 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 CCDC187A0A096LP49 1063 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 SAGE2PA6NJ88 616 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 VSTM2BA6NLU5 285 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 TMEM229AB2RXF0 380 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 IDSB3KWA1 339 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 K7ENP7 123 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 FAAHO00519 579 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 UGT2B11O75310 529 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 KCNK2O95069 426 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 TNFAIP8O95379 198 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 IGHEP01854 428 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 RPSAP08865 295 aaKnown RBP8.27□□□□□ -1.09
VPS50-207ENST00000458530 JMJD7P0C870 316 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 TNFRSF1BP20333 461 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 SOX18P35713 384 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 IFNGR2P38484 337 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 EMP2P54851 167 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 SLC37A1P57057 533 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 PSG6Q00889 435 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 IL18R1Q13478 541 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 PDK3Q15120 406 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.27□□□□□ -1.09
VPS50-207ENST00000458530 MICAQ29983 383 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 IQCCQ4KMZ1 466 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 NHSL2Q5HYW2 709 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 FGD3Q5JSP0 725 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 C6orf52Q5T4I8 152 aa8.27□□□□□ -1.09
VPS50-207ENST00000458530 TMEM164Q5U3C3 297 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms