RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 NRP2O60462 931 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 NCR1O76036 304 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 TJP3O95049 919 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 PRSS23O95084 383 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ANP32DO95626 131 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ESRRBO95718 433 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FADS2O95864 444 aaKnown RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 CST4P01036 141 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 IFNA4P05014 189 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 S100A8P05109 93 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FTH1P19P0C7X4 201 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 UBCP0CG48 685 aaKnown RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 SMIM10L1P0DMW3 83 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 RRASP10301 218 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FGF5P12034 268 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FCGR1AP12314 374 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FCGR2AP12318 317 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 MMP8P22894 467 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 DNASE1P24855 282 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 MST1P26927 711 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 PRDX5P30044 214 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 THBS4P35443 961 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 GPX4P36969 197 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 BTDP43251 543 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 BRCC3P46736 316 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 RFX5P48382 616 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 MRPL19P49406 292 aaKnown RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 ERVK-25P63136 954 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ADARB1P78563 741 aaKnown RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 CDC42EP1Q00587 391 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 SP3Q02447 781 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 PUDPQ08623 228 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 RBBP4Q09028 425 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 SREBF2Q12772 1141 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 HNRNPA0Q13151 305 aaKnown RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 SELPLGQ14242 412 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ITIH4Q14624 930 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 POU6F1Q14863 301 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 IRF4Q15306 451 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 KCNJ8Q15842 424 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 RBBP7Q16576 425 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ZNF699Q32M78 642 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 UBAP2Q5T6F2 1119 aaKnown RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 DCAF12L1Q5VU92 463 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FAM46CQ5VWP2 391 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 RHBDD2Q6NTF9 364 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 EFCAB12Q6NXP0 572 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 SPESP1Q6UW49 350 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 GLDNQ6ZMI3 551 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 ASB18Q6ZVZ8 466 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ZNF589Q86UQ0 364 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 XYLT1Q86Y38 959 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 PHF13Q86YI8 300 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 BOD1L2Q8IYS8 172 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FAM71AQ8IYT1 594 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 RNF113BQ8IZP6 322 aaKnown RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 GABRG1Q8N1C3 465 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 LCORLQ8N3X6 602 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 STX19Q8N4C7 294 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 TEX26Q8N6G2 289 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 OR5T2Q8NGG2 359 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 MARCH1Q8TCQ1 289 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 RAET1EQ8TD07 263 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 CXorf40AQ8TE69 158 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 CA5BP1Q8WTZ4 195 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FAR1Q8WVX9 515 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ACOT11Q8WXI4 607 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 OSTF1Q92882 214 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 R3HDM4Q96D70 268 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 SMIM10Q96HG1 83 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FAR2Q96K12 515 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FAM210BQ96KR6 192 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ZNF570Q96NI8 536 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 SLC46A1Q96NT5 459 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 SERPINB12Q96P63 405 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 BBC3Q96PG8 261 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 CMKLR1Q99788 373 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ADAM2Q99965 735 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 NIPSNAP1Q9BPW8 284 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 NICN1Q9BSH3 213 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 SIRPDQ9H106 197 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 FAM83DQ9H4H8 585 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 CCDC134Q9H6E4 229 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 SYNPO2LQ9H987 977 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 MYOZ2Q9NPC6 264 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 AKIP1Q9NQ31 210 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 IFT46Q9NQC8 304 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 COA4Q9NYJ1 87 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 VAPAQ9P0L0 249 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 IL17BQ9UHF5 180 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ZNF225Q9UK10 706 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 PITPNC1Q9UKF7 332 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 DRG1Q9Y295 367 aaKnown RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 PIGLQ9Y2B2 252 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 OR10H1Q9Y4A9 318 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 TMEM184BQ9Y519 407 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 POLR3HQ9Y535 204 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 ASB4Q9Y574 426 aa5.02□□□□□ -1.61
VPS41-209ENST00000457055 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.02□□□□□ -1.61
VPS41-209ENST00000457055 KPTNQ9Y664 436 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms