RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ANKRD9Q96BM1 317 aaPredicted RBP14.01□□□□□ -0.17
LDLR-202ENST00000455727 JAM3Q9BX67 310 aa14.01□□□□□ -0.17
LDLR-202ENST00000455727 SEMA6CQ9H3T2 930 aa14.01□□□□□ -0.17
LDLR-202ENST00000455727 SNTG1Q9NSN8 517 aa14.01□□□□□ -0.17
LDLR-202ENST00000455727 KCNE5Q9UJ90 142 aa14.01□□□□□ -0.17
LDLR-202ENST00000455727 ZNF223Q9UK11 482 aaPredicted RBP14.01□□□□□ -0.17
LDLR-202ENST00000455727 SHISA7A6NL88 538 aa14□□□□□ -0.17
LDLR-202ENST00000455727 CDC42EP2O14613 210 aa14□□□□□ -0.17
LDLR-202ENST00000455727 BRINP1O60477 761 aa14□□□□□ -0.17
LDLR-202ENST00000455727 SLC35E2P0CK97 266 aa14□□□□□ -0.17
LDLR-202ENST00000455727 NUDT1P36639 197 aa14□□□□□ -0.17
LDLR-202ENST00000455727 SLC1A3P43003 542 aa14□□□□□ -0.17
LDLR-202ENST00000455727 SEPHS1P49903 392 aa14□□□□□ -0.17
LDLR-202ENST00000455727 VSX2P58304 361 aaPredicted RBP14□□□□□ -0.17
LDLR-202ENST00000455727 DEFA1P59665 94 aa14□□□□□ -0.17
LDLR-202ENST00000455727 DEFA3P59666 94 aa14□□□□□ -0.17
LDLR-202ENST00000455727 ACSM1Q08AH1 577 aa14□□□□□ -0.17
LDLR-202ENST00000455727 DSG2Q14126 1118 aa14□□□□□ -0.17
LDLR-202ENST00000455727 FZD2Q14332 565 aa14□□□□□ -0.17
LDLR-202ENST00000455727 OR1Q1Q15612 314 aa14□□□□□ -0.17
LDLR-202ENST00000455727 TAF8Q7Z7C8 310 aa14□□□□□ -0.17
LDLR-202ENST00000455727 GPR151Q8TDV0 419 aa14□□□□□ -0.17
LDLR-202ENST00000455727 UFD1Q92890 307 aa14□□□□□ -0.17
LDLR-202ENST00000455727 SDHCQ99643 169 aaPredicted RBP14□□□□□ -0.17
LDLR-202ENST00000455727 NKX2-2O95096 273 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 LYPD3O95274 346 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 IGHA1P01876 353 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 PRG2P13727 222 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 HTR2AP28223 471 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 FGF9P31371 208 aaPredicted RBP13.99□□□□□ -0.17
LDLR-202ENST00000455727 GABRA5P31644 462 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 POU6F2P78424 691 aaPredicted RBP13.99□□□□□ -0.17
LDLR-202ENST00000455727 CD200R1LQ6Q8B3 271 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 ARHGEF39Q8N4T4 335 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 GATAD2BQ8WXI9 593 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 MSANTD3Q96H12 275 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 KCTD7Q96MP8 289 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 CCDC3Q9BQI4 270 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 UBQLN3Q9H347 655 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 FN3KQ9H479 309 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 FBXO34Q9NWN3 711 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 POMT2Q9UKY4 750 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 CBLCQ9ULV8 474 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 UNC119BA6NIH7 251 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 SLC30A4O14863 429 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 PLD2O14939 933 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 CDRT1O95170 752 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 CH25HO95992 272 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 CELA2BP08218 269 aaPredicted RBP13.99□□□□□ -0.17
LDLR-202ENST00000455727 CT62P0C5K7 136 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 THEGLP0DJG4 465 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 GAAP10253 952 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 HHEXQ03014 270 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 RPL13AP3Q6NVV1 102 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 SFTPA2Q8IWL1 248 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 PSD4Q8NDX1 1056 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 TMEM239Q8WW34 195 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 SAMD8Q96LT4 415 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 COQ7Q99807 217 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 ZNF649Q9BS31 505 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 C14orf105Q9NVL8 296 aa13.99□□□□□ -0.17
LDLR-202ENST00000455727 H2AFY2Q9P0M6 372 aaPredicted RBP13.99□□□□□ -0.17
LDLR-202ENST00000455727 PEX12O00623 359 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 COQ9O75208 318 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 ATP6V1G1O75348 118 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 APOL3O95236 402 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 CTSEP14091 401 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 DRD5P21918 477 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 GABRA3P34903 492 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 GCGRP47871 477 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 SLC9A3P48764 834 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 BLKP51451 505 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 PSPHP78330 225 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 COL19A1Q14993 1142 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 EXOSC7Q15024 291 aaKnown RBP13.98□□□□□ -0.17
LDLR-202ENST00000455727 ARMC6Q6NXE6 501 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 QSOX2Q6ZRP7 698 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 TMPRSS11FQ6ZWK6 438 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 GID4Q8IVV7 300 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 OR52N1Q8NH53 320 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 ASB15Q8WXK1 588 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 TOE1Q96GM8 510 aaKnown RBP13.98□□□□□ -0.17
LDLR-202ENST00000455727 CD180Q99467 661 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 SIDT1Q9NXL6 827 aaKnown RBP13.98□□□□□ -0.17
LDLR-202ENST00000455727 TMEM5Q9Y2B1 443 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 GSTK1Q9Y2Q3 226 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 C2CD4DB7Z1M9 353 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 SGK494L7N484 410 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 CHST10O43529 356 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 ZGLP1P0C6A0 271 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 MSL3P1P0C860 447 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 GKN3PP0CG01 181 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 ZNF542PQ5EBM4 170 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 C22orf42Q6IC83 251 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 ZNF613Q6PF04 617 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 HSDL2Q6YN16 418 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 TMPRSS11AQ6ZMR5 421 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 WDR88Q6ZMY6 472 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 C11orf74Q86VG3 221 aa13.98□□□□□ -0.17
LDLR-202ENST00000455727 SHISA5Q8N114 240 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms