RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 NRG3P56975 720 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CD47Q08722 323 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 NSDHLQ15738 373 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 FGD3Q5JSP0 725 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ARMC4Q5T2S8 1044 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 C12orf73Q69YU5 71 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM81Q6P7N7 255 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 PODNL1Q6PEZ8 512 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ULK3Q6PHR2 472 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF517Q6ZMY9 492 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 TMPRSS11FQ6ZWK6 438 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 COX15Q7KZN9 410 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 PRSS48Q7RTY5 328 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 GLRX5Q86SX6 157 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF441Q8N8Z8 693 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 B3GNT7Q8NFL0 401 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 OR4K5Q8NGD3 323 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 OR8J1Q8NGP2 316 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 STT3BQ8TCJ2 826 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 TTC9Q92623 222 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ADIPOR1Q96A54 375 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 DTNBP1Q96EV8 351 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 VMP1Q96GC9 406 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC41A3Q96GZ6 507 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CMKLR1Q99788 373 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF426Q9BUY5 554 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 POLDIP3Q9BY77 421 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 VN1R1Q9GZP7 353 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 RXFP3Q9NSD7 469 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 MAN2C1Q9NTJ4 1040 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CLN6Q9NWW5 311 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 IMPAD1Q9NX62 359 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 REV1Q9UBZ9 1251 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 KLHL3Q9UH77 587 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ERVK-19Q9WJR5 959 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 OR10H1Q9Y4A9 318 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 PCDHGA3Q9Y5H0 932 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 A0A1W2PS29 197 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SERINC4A6NH21 518 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 OR6C70A6NIJ9 312 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC1A7O00341 560 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 KLF4O43474 513 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 OR10H3O60404 316 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 FCMRO60667 390 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ALOX12BO75342 701 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ZIC2O95409 532 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ANGPTL1O95841 491 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ITIH1P19827 911 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 MAOAP21397 527 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 PRKACGP22612 351 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 FKBP2P26885 142 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CAPZA2P47755 286 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SLC9A3P48764 834 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 TMED10P49755 219 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CASP9P55211 416 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 DLX5P56178 289 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SNRPNP63162 240 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 BTG2P78543 158 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 MAT1AQ00266 395 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 PRKCDQ05655 676 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 KCNAB1Q14722 419 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 EXOSC7Q15024 291 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SEC23BQ15437 767 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 GPR68Q15743 365 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 EXT1Q16394 746 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ISXQ2M1V0 245 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 MRPL2Q5T653 305 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 MRPL14Q6P1L8 145 aaKnown RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 KLHL17Q6TDP4 642 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ZNF730Q6ZMV8 503 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 VRK2Q86Y07 508 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 P3H2Q8IVL5 708 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CYP4Z2PQ8N1L4 340 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 FAM26EQ8N5C1 309 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 BCORP1Q8N888 145 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 RCBTB1Q8NDN9 531 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 OR10Q1Q8NGQ4 319 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 OR6S1Q8NH40 331 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CLIP3Q96DZ5 547 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CRELD1Q96HD1 420 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 MYCBPQ99417 103 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM43Q9BTV4 400 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CNPPD1Q9BV87 410 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 LAT2Q9GZY6 243 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 POLR1BQ9H9Y6 1135 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 FKBP14Q9NWM8 211 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 IL20Q9NYY1 176 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 GPN3Q9UHW5 284 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 MKLN1Q9UL63 735 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 CHST2Q9Y4C5 530 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 TMEM184BQ9Y519 407 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 PCDHGA6Q9Y5G7 932 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 MAGED1Q9Y5V3 778 aaPredicted RBP6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 ASXL3Q9C0F0 2248 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 SCN2AQ99250 2005 aa6.32□□□□□ -1.4
ECHDC1-210ENST00000454859 EXPH5Q8NEV8 1989 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 TRBV4-1A0A0J9YWV2 114 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 M0R3H8 397 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 SCDO00767 359 aa6.31□□□□□ -1.4
ECHDC1-210ENST00000454859 OR6B1O95007 311 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms