RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 MYL12BO14950 172 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 SRPX2O60687 465 aaPredicted RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 CSO75390 466 aaKnown RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 CSTF2P33240 577 aaKnown RBP eCLIP10.93□□□□□ -0.66
VTA1-203ENST00000452973 OR1D4P47884 311 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 PSMD7P51665 324 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 PSG6Q00889 435 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 INAQ16352 499 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 DECR1Q16698 335 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 PRTGQ2VWP7 1150 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 TTLL10Q6ZVT0 673 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 ZNF367Q7RTV3 350 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 PRSS58Q8IYP2 241 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 C9orf43Q8TAL5 461 aaPredicted RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 FNDC8Q8TC99 324 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 TMEM203Q969S6 136 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 DGAT2Q96PD7 388 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 SLC38A2Q96QD8 506 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.93□□□□□ -0.66
VTA1-203ENST00000452973 PDE7BQ9NP56 450 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 C20orf141Q9NUB4 165 aa10.93□□□□□ -0.66
VTA1-203ENST00000452973 CDHR4A6H8M9 788 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 OR5F1O95221 314 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 ARL4DP49703 201 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 MBOAT2Q6ZWT7 520 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 FAM26EQ8N5C1 309 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 SNRNP27Q8WVK2 155 aaKnown RBP10.92□□□□□ -0.66
VTA1-203ENST00000452973 CTHRC1Q96CG8 243 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 SLIRPQ9GZT3 109 aaKnown RBP10.92□□□□□ -0.66
VTA1-203ENST00000452973 FOLH1BQ9HBA9 442 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 HMG20AQ9NP66 347 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 OR10H1Q9Y4A9 318 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 CCRL2O00421 344 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 KIAA0513O60268 411 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 BRINP1O60477 761 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 IFI30P13284 250 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 ETV5P41161 510 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 ETV1P50549 477 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 SSX1Q16384 188 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 NDUFAF6Q330K2 333 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 MINDY4Q4G0A6 757 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 OR2G6Q5TZ20 316 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 LIPKQ5VXJ0 399 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 RASSF6Q6ZTQ3 369 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 CADM2Q8N3J6 435 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 ANKK1Q8NFD2 765 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 OR52I1Q8NGK6 324 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 OR4Q3Q8NH05 313 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 OR51Q1Q8NH59 317 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 B4GALNT2Q8NHY0 566 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.92□□□□□ -0.66
VTA1-203ENST00000452973 RNFT2Q96EX2 444 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 BCL7BQ9BQE9 202 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 GALNT8Q9NY28 637 aa10.92□□□□□ -0.66
VTA1-203ENST00000452973 DHCR7Q9UBM7 475 aaKnown RBP10.92□□□□□ -0.66
VTA1-203ENST00000452973 TRAPPC13A5PLN9 417 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 LRRTM2O43300 516 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 HYAL3O43820 417 aaPredicted RBP10.91□□□□□ -0.66
VTA1-203ENST00000452973 IGKV1D-16P01601 117 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 SAGP10523 405 aaPredicted RBP10.91□□□□□ -0.66
VTA1-203ENST00000452973 BMP4P12644 408 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 ATP6V1E1P36543 226 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 EMDP50402 254 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 BNC1Q01954 994 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 OCLNQ16625 522 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 TMEM201Q5SNT2 666 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 FCRLBQ6BAA4 426 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 TSSK4Q6SA08 328 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 LHFPL3Q86UP9 236 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 ARHGEF39Q8N4T4 335 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 BBS1Q8NFJ9 593 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 OPALINQ96PE5 141 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 STACQ99469 402 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 ENKD1Q9H0I2 346 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 NLGN3Q9NZ94 848 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 PLCL2Q9UPR0 1127 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 RNF215Q9Y6U7 377 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 RP1P56715 2156 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 LMO7DNF2Z398 122 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 CTNSO60931 367 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 COQ9O75208 318 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 THBS1P07996 1170 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 HBQ1P09105 142 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 S1PR1P21453 382 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 GCGRP47871 477 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 FNTBP49356 437 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 SKP1P63208 163 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 DMWDQ09019 674 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 NCF4Q15080 339 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 SLC36A4Q6YBV0 504 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 GATAD2AQ86YP4 633 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 RCBTB1Q8NDN9 531 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 OR51A7Q8NH64 312 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 TMEM163Q8TC26 289 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 PRSS27Q9BQR3 290 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 TPK1Q9H3S4 243 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 TBC1D17Q9HA65 648 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 PNO1Q9NRX1 252 aaKnown RBP10.91□□□□□ -0.66
VTA1-203ENST00000452973 OSGIN1Q9UJX0 560 aa10.91□□□□□ -0.66
VTA1-203ENST00000452973 SATB2Q9UPW6 733 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms