RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 OLIG3Q7RTU3 272 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 ANKRD46Q86W74 232 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 CNEP1R1Q8N9A8 125 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 ACBD4Q8NC06 268 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 OR4A15Q8NGL6 344 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 OR4C3Q8NH37 302 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 ADAMTS15Q8TE58 950 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 OR5P2Q8WZ92 322 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 SLC35G5Q96KT7 338 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 PRPF18Q99633 342 aaKnown RBP8.75□□□□□ -1.01
USP54-207ENST00000451492 NPAS1Q99742 590 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 TREX2Q9BQ50 279 aaPredicted RBP8.75□□□□□ -1.01
USP54-207ENST00000451492 KLHDC3Q9BQ90 382 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 PIGQQ9BRB3 760 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 GPATCH1Q9BRR8 931 aaKnown RBP8.75□□□□□ -1.01
USP54-207ENST00000451492 PINK1Q9BXM7 581 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 TMEM185BQ9H7F4 350 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 CALHM2Q9HA72 323 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 CRIM1Q9NZV1 1036 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 CLCF1Q9UBD9 225 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 FAF1Q9UNN5 650 aaPredicted RBP8.75□□□□□ -1.01
USP54-207ENST00000451492 KCNE3Q9Y6H6 103 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 NOTCH2Q04721 2471 aa8.75□□□□□ -1.01
USP54-207ENST00000451492 UQCRHLA0A096LP55 91 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 GOLGA8QA0A0J9YX86 632 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 RNF103-CHMP3A0A140T963 221 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 TMEM120BA0PK00 339 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 GOLGA8OA6NCC3 632 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 SLC22A20A6NK97 555 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 GOLGA8NF8WBI6 632 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 EIF1AYO14602 144 aaKnown RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 ERLIN1O75477 346 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 CPSF4O95639 269 aaKnown RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 NUDT14O95848 222 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 DHRS4L1P0CG22 281 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 PEPDP12955 493 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 PRPS1L1P21108 318 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 OPRM1P35372 400 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 MAP3K8P41279 467 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 ZNF41P51814 821 aaPredicted RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 SUCLG1P53597 346 aaKnown RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 CLDN20P56880 219 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 MAGOHP61326 146 aaKnown RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 HBA1P69905 142 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 EMX2Q04743 252 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 C17orf67Q0P5P2 114 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 MLC1Q15049 377 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 CD226Q15762 336 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.74□□□□□ -1.01
USP54-207ENST00000451492 NDUFAF6Q330K2 333 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 LSM12Q3MHD2 195 aaKnown RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 FLYWCH1Q4VC44 716 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 VWA1Q6PCB0 445 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 WDR75Q8IWA0 830 aaKnown RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 HOMEZQ8IX15 550 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 TMCO5AQ8N6Q1 288 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 OR56A1Q8NGH5 318 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 RFWD2Q8NHY2 731 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 LINC01560Q8TB33 94 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 PHOSPHO1Q8TCT1 267 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 FIG4Q92562 907 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 RNASE6Q93091 150 aaKnown RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 ARSGQ96EG1 525 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 PGM2Q96G03 612 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 ZNF845Q96IR2 970 aaPredicted RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 MARK4Q96L34 752 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 OR7D2Q96RA2 312 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 TM9SF2Q99805 663 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 RBM24Q9BX46 236 aaKnown RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 BTBD2Q9BX70 525 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 ACTRT3Q9BYD9 372 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 DPY30Q9C005 99 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 BHLHE41Q9C0J9 482 aaPredicted RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 NEUROD4Q9HD90 331 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 DNAJB12Q9NXW2 375 aaKnown RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 ZNF629Q9UEG4 869 aaPredicted RBP8.74□□□□□ -1.01
USP54-207ENST00000451492 KCNN3Q9UGI6 736 aa8.74□□□□□ -1.01
USP54-207ENST00000451492 A0A1W2PNV4 684 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 ALG1L2C9J202 215 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 HCRTR2O43614 444 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 TNFRSF21O75509 655 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 RCBTB2O95199 551 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 LBPP18428 481 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 TBXA2RP21731 343 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 EIF1AXP47813 144 aaKnown RBP8.73□□□□□ -1.01
USP54-207ENST00000451492 CCR4P51679 360 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 CLDN15P56746 228 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 CLDN8P56748 225 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 ZNF117Q03924 483 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 PON3Q15166 354 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 POU4F3Q15319 338 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 SGCBQ16585 318 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 TNFAIP8L3Q5GJ75 292 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 ZCCHC12Q6PEW1 402 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 ADGRE4PQ86SQ3 457 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 RIMKLAQ8IXN7 391 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 FNDC9Q8TBE3 224 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 SFXN5Q8TD22 340 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 HOXB13Q92826 284 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms