RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SPNS1Q9H2V7 528 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 MRPS30Q9NP92 439 aaKnown RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 MBD2Q9UBB5 411 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 U3KQ87 197 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 A0A087WUU8 490 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 EIF4EP06730 217 aaKnown RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 POLR2CP19387 275 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 HLA-FP30511 346 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 GDNFP39905 211 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF155Q12901 538 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 PUM1Q14671 1186 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 PLPP4Q5VZY2 271 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 SFXN4Q6P4A7 337 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 SLCO4C1Q6ZQN7 724 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 ADGRF3Q8IZF5 1079 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 HDDC3Q8N4P3 179 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF454Q8N9F8 522 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 C3orf49Q96BT1 292 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 ADAD1Q96M93 576 aaKnown RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 WDR26Q9H7D7 661 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 ZMAT3Q9HA38 289 aaKnown RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 DIMT1Q9UNQ2 313 aaKnown RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 KANTRA0A1W2PQU2 76 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 LEUTXA8MZ59 168 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 DOK2O60496 412 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 UBXN7O94888 489 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 C1SP09871 688 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 MPC1LP0DKB6 136 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 GABRB1P18505 474 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 DDX6P26196 483 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 HSD3B2P26439 372 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 SWI5Q1ZZU3 235 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 TMEFF1Q8IYR6 380 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 TMEM185AQ8NFB2 350 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 MRPL48Q96GC5 212 aaKnown RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 MNTQ99583 582 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 SDHCQ99643 169 aaPredicted RBP11.64□□□□□ -0.55
UBE3B-204ENST00000449510 MFFQ9GZY8 342 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 RNF32Q9H0A6 362 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 NOX3Q9HBY0 568 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 B3GAT2Q9NPZ5 323 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 MED31Q9Y3C7 131 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 STON1Q9Y6Q2 735 aa11.64□□□□□ -0.55
UBE3B-204ENST00000449510 ATG2BQ96BY7 2078 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 WASH3PC4AMC7 463 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 H7C0S8 307 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 LEFTY2O00292 366 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 ZNF432O94892 652 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 WISP3O95389 354 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-204ENST00000449510 SELPP16109 830 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 NPR2P20594 1047 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 HLA-DMAP28067 261 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 MVDP53602 400 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 B4GALNT1Q00973 533 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 YOD1Q5VVQ6 348 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-204ENST00000449510 RTN4RL1Q86UN2 441 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-204ENST00000449510 ATCAYQ86WG3 371 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 LRRC28Q86X40 367 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-204ENST00000449510 PRSS58Q8IYP2 241 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 ARL14Q8N4G2 192 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 DPF3Q92784 378 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 NUS1Q96E22 293 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 PLEKHB1Q9UF11 243 aaPredicted RBP11.63□□□□□ -0.55
UBE3B-204ENST00000449510 TRBV5-3A0A0A0MS03 114 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 OR52A4PA6NMU1 304 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 EEF1E1-BLOC1S5C9J1V9 151 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 LANCL1O43813 399 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 RBBP9O75884 186 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 IFNA6P05013 189 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 NPPBP16860 134 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 HTR4Q13639 388 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 FAM74A1Q5RGS3 127 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 IDO2Q6ZQW0 420 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 METTL3Q86U44 580 aaKnown RBP11.63□□□□□ -0.55
UBE3B-204ENST00000449510 TMEM255BQ8WV15 326 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 ZG16BQ96DA0 208 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 SLC41A3Q96GZ6 507 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 DPP7Q9UHL4 492 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 MRPS23Q9Y3D9 190 aaKnown RBP11.63□□□□□ -0.55
UBE3B-204ENST00000449510 TCRBV16S1A1N1A0A5B0 115 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 ANTXRLA6NF34 631 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 DVL2O14641 736 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 C6P13671 934 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 AQP2P41181 271 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 MAGEB1P43366 347 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 MAP2K6P52564 334 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 PER3P56645 1201 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 PCGF3Q3KNV8 242 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 SLC25A35Q3KQZ1 300 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 RDH10Q8IZV5 341 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 ZFP82Q8N141 532 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 JAGN1Q8N5M9 183 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 OR52D1Q9H346 318 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 AUNIPQ9H7T9 357 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 ERVMER34-1Q9H9K5 563 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 SDHAF2Q9NX18 166 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 TAAR2Q9P1P5 351 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 OR1A2Q9Y585 309 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 NUBP2Q9Y5Y2 271 aa11.63□□□□□ -0.55
UBE3B-204ENST00000449510 TRABD2BA6NFA1 517 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms