RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 BAG5Q9UL15 447 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 ABCG2Q9UNQ0 655 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 ZNF232Q9UNY5 417 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 DTNAQ9Y4J8 743 aa12.9□□□□□ -0.34
SHMT2-203ENST00000449049 A0A1W2PQD3 144 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 DHRS12A0PJE2 317 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ANKRD33BA6NCL7 494 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 A6NL46 340 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 SYT5O00445 386 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 SCDO00767 359 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ENTPD5O75356 428 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 EPPINO95925 133 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 SEMG1P04279 462 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 GPIP06744 558 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 FESP07332 822 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ITPKBP27987 946 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 EVI2BP34910 448 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ERFP50548 548 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 HLCSP50747 726 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 CCL11P51671 97 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ZNF468Q5VIY5 522 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-203ENST00000449049 FNDC7Q5VTL7 733 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 TMEM81Q6P7N7 255 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 IL20RBQ6UXL0 311 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 APOOLQ6UXV4 268 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 VTCN1Q7Z7D3 282 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ADGRG5Q8IZF4 528 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 POGLUT1Q8NBL1 392 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 OR10G3Q8NGC4 313 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 OR5M3Q8NGP4 307 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 OR10Q1Q8NGQ4 319 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 APOBEC4Q8WW27 367 aaKnown RBP12.89□□□□□ -0.35
SHMT2-203ENST00000449049 PYURFQ96I23 114 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 HSH2DQ96JZ2 352 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 SECISBP2Q96T21 854 aaKnown RBP12.89□□□□□ -0.35
SHMT2-203ENST00000449049 CPNE5Q9HCH3 593 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 HPF1Q9NWY4 346 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 CHCHD2Q9Y6H1 151 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-203ENST00000449049 SPTBN4Q9H254 2564 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 FREM2Q5SZK8 3169 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ALG1L2C9J202 215 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ADAM10O14672 748 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 TP53I11O14683 189 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ADH7P40394 386 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 KCNJ10P78508 379 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 PLAURQ03405 335 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 RAPSNQ13702 412 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 EIPR1Q53HC9 387 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ISLR2Q6UXK2 745 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 COMTD1Q86VU5 262 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 CMIPQ8IY22 773 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 FDCSPQ8NFU4 85 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 GRHL3Q8TE85 626 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 SNRNP27Q8WVK2 155 aaKnown RBP12.89□□□□□ -0.35
SHMT2-203ENST00000449049 TPD52L3Q96J77 140 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 FAM210AQ96ND0 272 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 UGT2B28Q9BY64 529 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 MAGIXQ9H6Y5 334 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.89□□□□□ -0.35
SHMT2-203ENST00000449049 ANAPC2Q9UJX6 822 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 V9GYQ6 96 aa12.89□□□□□ -0.35
SHMT2-203ENST00000449049 CDHR4A6H8M9 788 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 SERINC4A6NH21 518 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 CLDN24A6NM45 220 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 HPGDP15428 266 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 PSMA4P25789 261 aaKnown RBP12.88□□□□□ -0.35
SHMT2-203ENST00000449049 ST13P50502 369 aaKnown RBP12.88□□□□□ -0.35
SHMT2-203ENST00000449049 MFAP5Q13361 173 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 ZSWIM7Q19AV6 140 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 MRPL2Q5T653 305 aaKnown RBP12.88□□□□□ -0.35
SHMT2-203ENST00000449049 RTL4Q6ZR62 310 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 ZNF614Q8N883 585 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 PAQR8Q8TEZ7 354 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 CANT1Q8WVQ1 401 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 SGCZQ96LD1 299 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 RNF32Q9H0A6 362 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 ASPMQ8IZT6 3477 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 DOCK10Q96BY6 2186 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 LGI1O95970 557 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 RPSAP08865 295 aaKnown RBP12.88□□□□□ -0.35
SHMT2-203ENST00000449049 CYB561P49447 251 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 RPP38P78345 283 aaKnown RBP12.88□□□□□ -0.35
SHMT2-203ENST00000449049 TUBA3CQ13748 450 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 IFI44LQ53G44 452 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 TUBA3EQ6PEY2 450 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 LINC00696Q6ZRV3 163 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 ZNF227Q86WZ6 799 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 GRAMD2AQ8IUY3 354 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 CYP4Z2PQ8N1L4 340 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 CLIP4Q8N3C7 705 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 FAM71CQ8NEG0 241 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 PROX1Q92786 737 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 SLCO4A1Q96BD0 722 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 NTNG2Q96CW9 530 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 SLC47A1Q96FL8 570 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 ARHGDIGQ99819 225 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 TBL1XR1Q9BZK7 514 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 RTN4RQ9BZR6 473 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 ARMC7Q9H6L4 198 aa12.88□□□□□ -0.35
SHMT2-203ENST00000449049 CCM2LQ9NUG4 571 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms