RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 MIER2Q8N344 545 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 ARFGAP2Q8N6H7 521 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 TRIML2Q8N7C3 387 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 WDSUB1Q8N9V3 476 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 PHF10Q8WUB8 498 aaKnown RBP13.25□□□□□ -0.29
USP39-206ENST00000448971 RNF138Q8WVD3 245 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 THOC1Q96FV9 657 aaKnown RBP13.25□□□□□ -0.29
USP39-206ENST00000448971 OR7D2Q96RA2 312 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 OR52E6Q96RD3 313 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 EBF4Q9BQW3 602 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 SLC35A5Q9BS91 424 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 BTBD2Q9BX70 525 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 GIN1Q9NXP7 522 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 ALKBH4Q9NXW9 302 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 ZIM2Q9NZV7 527 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 FBXL2Q9UKC9 423 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 PCDHGB3Q9Y5G1 929 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 ZNF407Q9C0G0 2248 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 HCFC1P51610 2035 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 SCDO00767 359 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 GMFGO60234 142 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 FADS1O60427 444 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 SCN2BO60939 215 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 WDR1O75083 606 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 OXSR1O95747 527 aaPredicted RBP13.24□□□□□ -0.29
USP39-206ENST00000448971 ANGPTL1O95841 491 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 MATN1P21941 496 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 UQCRC2P22695 453 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 SRD5A2P31213 254 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 IDH3AP50213 366 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 GAS1P54826 345 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 PHC1P78364 1004 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 LRRC74AQ0VAA2 488 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 GXYLT1Q4G148 440 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 TIGD2Q4W5G0 525 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 EXOSC6Q5RKV6 272 aaKnown RBP13.24□□□□□ -0.29
USP39-206ENST00000448971 C6orf120Q7Z4R8 191 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 ZAR1Q86SH2 424 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 MARCH3Q86UD3 253 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 GATSQ8NAP1 163 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 OR9I1Q8NGQ6 314 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 NTNG2Q96CW9 530 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 CCDC115Q96NT0 180 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 OR2B2Q9GZK3 357 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 SDR39U1Q9NRG7 319 aaPredicted RBP13.24□□□□□ -0.29
USP39-206ENST00000448971 TAS2R10Q9NYW0 307 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 BTNL2Q9UIR0 455 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 ANKHD1Q8IWZ3 2542 aaKnown RBP13.24□□□□□ -0.29
USP39-206ENST00000448971 ABCA4P78363 2273 aa13.24□□□□□ -0.29
USP39-206ENST00000448971 NCKAP5O14513 1909 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 DUXAA6NLW8 204 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 NDUFB5O43674 189 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 SOX30O94993 753 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 ANP32DO95626 131 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 IL6P05231 212 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 IGFBP2P18065 325 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 ACVR2AP27037 513 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 DPP4P27487 766 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 LCN1P31025 176 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 KHKP50053 298 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 CASP9P55211 416 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 CRYZQ08257 329 aaKnown RBP13.23□□□□□ -0.29
USP39-206ENST00000448971 EMC4Q5J8M3 183 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 RAET1LQ5VY80 246 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 TMEM211Q6ICI0 200 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 TNFAIP8L2Q6P589 184 aaPredicted RBP13.23□□□□□ -0.29
USP39-206ENST00000448971 MEX3BQ6ZN04 569 aaKnown RBP13.23□□□□□ -0.29
USP39-206ENST00000448971 C16orf62Q7Z3J2 963 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 RPRMLQ8N4K4 120 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 ZNF614Q8N883 585 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 ZNF527Q8NB42 609 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 SFXN2Q96NB2 322 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 CCDC28BQ9BUN5 200 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 OR51I1Q9H343 314 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 DSN1Q9H410 356 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 SERHL2Q9H4I8 314 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 PTGES2Q9H7Z7 377 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 RMND5AQ9H871 391 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 NPHS2Q9NP85 383 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 MED4Q9NPJ6 270 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 FBXO34Q9NWN3 711 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 COQ3Q9NZJ6 369 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 CAMK2AQ9UQM7 478 aa13.23□□□□□ -0.29
USP39-206ENST00000448971 RPH3AQ9Y2J0 694 aaPredicted RBP13.23□□□□□ -0.29
USP39-206ENST00000448971 NPIPA5A0A0B4J1W7 369 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 ALG1L2C9J202 215 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 NPIPA7E9PJI5 369 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 RFXANKO14593 260 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 EDF1O60869 148 aaKnown RBP13.22□□□□□ -0.29
USP39-206ENST00000448971 AK1P00568 194 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 NGFRP08138 427 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 NPIPA8P0DM63 369 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 GABRA1P14867 456 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 POLR2JP52435 117 aaKnown RBP13.22□□□□□ -0.29
USP39-206ENST00000448971 DSCR4P56555 118 aaPredicted RBP13.22□□□□□ -0.29
USP39-206ENST00000448971 HPCAP84074 193 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 GANABQ14697 944 aaKnown RBP13.22□□□□□ -0.29
USP39-206ENST00000448971 FLYWCH1Q4VC44 716 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 C6orf10Q5SRN2 563 aa13.22□□□□□ -0.29
USP39-206ENST00000448971 C1orf185Q5T7R7 199 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms