RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 SLC38A2Q96QD8 506 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM173AQ9BQD7 235 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF768Q9H5H4 540 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SP140LQ9H930 580 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM9Q9P0T7 183 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 C5AR2Q9P296 337 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 LAMB1P07942 1786 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 HCN1O60741 890 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 IFNW1P05000 195 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ANXA2P07355 339 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 CDH11P55287 796 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM135Q86UB9 458 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR7G3Q8NG95 312 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR52N5Q8NH56 324 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR1L3Q8NH93 324 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 UTP15Q8TED0 518 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 RAB1CQ92928 201 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 KHSRPQ92945 711 aaKnown RBP eCLIP5.25□□□□□ -1.577e-7■■■■□ 21.1
CDC42BPA-209ENST00000448940 POP5Q969H6 163 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 COQ8BQ96D53 544 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SENP5Q96HI0 755 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC22A7Q9Y694 548 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 A0A1W2PR77 199 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF500O60304 480 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ATP6V1B2P21281 511 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 DSTNP60981 165 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 RBBP4Q09028 425 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 MED22Q15528 200 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 TIPARPQ7Z3E1 657 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZER1Q7Z7L7 766 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 OAFQ86UD1 273 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 TIGD4Q8IY51 512 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR52E4Q8NGH9 312 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 C3orf30Q96M34 536 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 ONECUT1Q9UBC0 465 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC23A2Q9UGH3 650 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 LAMP3Q9UQV4 416 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 PRSS21Q9Y6M0 314 aa5.25□□□□□ -1.57
CDC42BPA-209ENST00000448940 GMNCA6NCL1 334 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 IDH3BO43837 385 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM155BO75949 473 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 SRD5A1P18405 259 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 MATN1P21941 496 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 ENPP1P22413 925 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 EIF1P41567 113 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC6A8P48029 635 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 MESP2Q0VG99 397 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 PTGR1Q14914 329 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 CEP78Q5JTW2 689 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 GRHL2Q6ISB3 625 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 TTC27Q6P3X3 843 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 FIGNL1Q6PIW4 674 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 RHEBL1Q8TAI7 183 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC35A5Q9BS91 424 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 PDFQ9HBH1 243 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 A8MT66 165 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 BLOC1S5-TXNDC5H3BN57 136 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 PSMD9O00233 223 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 UGDHO60701 494 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 ITGB2P05107 769 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 GSTM3P21266 225 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 SCTRP47872 440 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 UGT2B15P54855 530 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 TAS2R38P59533 333 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 TXNL4AP83876 142 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 PTPRRQ15256 657 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 PODNL1Q6PEZ8 512 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 Q6ZTK2 550 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 SLC30A8Q8IWU4 369 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 DND1Q8IYX4 353 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 LRRC34Q8IZ02 419 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 KLHL36Q8N4N3 616 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 OR5AK3PQ8NH89 298 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 CD200R1Q8TD46 325 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 ZNF778Q96MU6 729 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 HDHD5Q9BXW7 423 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 UCK1Q9HA47 277 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 KLHL9Q9P2J3 617 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 LINC01387J3KSC0 135 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 CRHR1P34998 444 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 NDUFA5Q16718 116 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 FAM174BQ3ZCQ3 159 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 ARL13AQ5H913 290 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 ATG9BQ674R7 924 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 UGT2A3Q6UWM9 527 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 PHB2Q99623 299 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 LMF2Q9BU23 707 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 GATA5Q9BWX5 397 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 APMAPQ9HDC9 416 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 C2orf42Q9NWW7 574 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 ARL2BPQ9Y2Y0 163 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 M0QZ24 198 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 PLOD2O00469 737 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 KPNA4O00629 521 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 EDN3P14138 238 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 HOXB3P14651 431 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 SOX18P35713 384 aa5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 GABPB1Q06547 395 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 USF2Q15853 346 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-209ENST00000448940 TMEM107Q6UX40 140 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms