RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 SPATA5L1Q9BVQ7 753 aa13.77□□□□□ -0.21
SF1-211ENST00000448404 LYARQ9NX58 379 aaKnown RBP13.77□□□□□ -0.21
SF1-211ENST00000448404 CNTRLQ7Z7A1 2325 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CACNA1CQ13936 2221 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 TRAV27A0A087WT01 109 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CYR61O00622 381 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 HRO43593 1189 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CDRT1O95170 752 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 DLGAP3O95886 979 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 SCG5P05408 212 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CTSEP14091 401 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 PPP5CP53041 499 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 FXYD6P3P58550 94 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 FAM53BQ14153 422 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CEBPEQ15744 281 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 DCST2Q5T1A1 773 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 PLEKHG7Q6ZR37 379 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 ABI3BPQ7Z7G0 1075 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CYB561A3Q8NBI2 242 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 BAHD1Q8TBE0 780 aaPredicted RBP13.76□□□□□ -0.21
SF1-211ENST00000448404 S100ZQ8WXG8 99 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CRELD1Q96HD1 420 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 ZSCAN32Q9NX65 697 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 MAGEB4O15481 346 aaPredicted RBP13.76□□□□□ -0.21
SF1-211ENST00000448404 MPZL2O60487 215 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 MRPS14O60783 128 aaKnown RBP13.76□□□□□ -0.21
SF1-211ENST00000448404 MRPL3P09001 348 aaKnown RBP13.76□□□□□ -0.21
SF1-211ENST00000448404 ZGLP1P0C6A0 271 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 SMSP52788 366 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 SLC16A1P53985 500 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 SMIM11AP58511 58 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 IFITM2Q01629 132 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 GAS6Q14393 721 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 THSD4Q6ZMP0 1018 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CAMKK1Q8N5S9 505 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 KBTBD8Q8NFY9 601 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 OR52R1Q8NGF1 315 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CNOT9Q92600 299 aaKnown RBP13.76□□□□□ -0.21
SF1-211ENST00000448404 C1GALT1C1Q96EU7 318 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 SDHCQ99643 169 aaPredicted RBP13.76□□□□□ -0.21
SF1-211ENST00000448404 HDHD5Q9BXW7 423 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 POLDIP3Q9BY77 421 aaKnown RBP13.76□□□□□ -0.21
SF1-211ENST00000448404 MMP27Q9H306 513 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 ZNF576Q9H609 170 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 CCDC86Q9H6F5 360 aaKnown RBP13.76□□□□□ -0.21
SF1-211ENST00000448404 MALT1Q9UDY8 824 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 MUTYHQ9UIF7 546 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 PCOLCE2Q9UKZ9 415 aa13.76□□□□□ -0.21
SF1-211ENST00000448404 ANKRD34BA5PLL1 514 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 DRD1P21728 446 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 ST3GAL3Q11203 375 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 TAB1Q15750 504 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 RAB30Q15771 203 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 FBXO43Q4G163 708 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 NKAIN2Q5VXU1 208 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 PLBD1Q6P4A8 553 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 TRIM69Q86WT6 500 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 CPOQ8IVL8 374 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 FAM26EQ8N5C1 309 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 C7orf57Q8NEG2 295 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 OR13C2Q8NGS9 318 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 NT5CQ8TCD5 201 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 TMED9Q9BVK6 235 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 TRIM45Q9H8W5 580 aaPredicted RBP13.75□□□□□ -0.21
SF1-211ENST00000448404 TBC1D17Q9HA65 648 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 HINT3Q9NQE9 182 aaKnown RBP13.75□□□□□ -0.21
SF1-211ENST00000448404 TESQ9UGI8 421 aaKnown RBP13.75□□□□□ -0.21
SF1-211ENST00000448404 NDOR1Q9UHB4 597 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 ENOPH1Q9UHY7 261 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 LIPT1Q9Y234 373 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 MAU2Q9Y6X3 613 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 C17orf51A8MQB3 221 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 REM1O75628 298 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 UPK1BO75841 260 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 SLITRK5O94991 958 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 KCNK2O95069 426 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 TNFP01375 233 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 IGKV1D-16P01601 117 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 NDUFS1P28331 727 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 TLX1P31314 330 aaPredicted RBP13.75□□□□□ -0.21
SF1-211ENST00000448404 TNFSF8P32971 234 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 S100A5P33763 92 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 GCGRP47871 477 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 MTNR1AP48039 350 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 EMDP50402 254 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 PGDP52209 483 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 EFNB1P98172 346 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 KCNAB1Q14722 419 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 TMEM201Q5SNT2 666 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 DESI1Q6ICB0 168 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 HEPHL1Q6MZM0 1159 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 PEX5LQ8IYB4 626 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 CA13Q8N1Q1 262 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 CELF2-AS1Q8N7Q2 184 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 GATSQ8NAP1 163 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 CAMKVQ8NCB2 501 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 OR51G2Q8NGK0 314 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 PIGXQ8TBF5 258 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 TMEM163Q8TC26 289 aa13.75□□□□□ -0.21
SF1-211ENST00000448404 SLC22A18Q96BI1 424 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms