RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 PROK2Q9HC23 129 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 TIMMDC1Q9NPL8 285 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZNF71Q9NQZ8 489 aaPredicted RBP16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 RYDENQ9NUL5 291 aaKnown RBP16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 KLRF1Q9NZS2 232 aa16.48■□□□□ 0.23
TRAPPC4-203ENST00000447216 ITPR1Q14643 2758 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 AGAP5A6NIR3 686 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 CLDN24A6NM45 220 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 ADAM10O14672 748 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 ARPC2O15144 300 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 P04436 131 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 ETS2P15036 469 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 HPGDP15428 266 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 KDELR2P33947 212 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 GPR85P60893 370 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 KCNJ2P63252 427 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 RPP38P78345 283 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 MS4A2Q01362 244 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 RHDQ02161 417 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 DMTNQ08495 405 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 KLHL26Q53HC5 615 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 ASB18Q6ZVZ8 466 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 PATL1Q86TB9 770 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 KRT73Q86Y46 540 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 PEX5LQ8IYB4 626 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 RBMXL3Q8N7X1 1067 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 EXD3Q8N9H8 876 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZNF527Q8NB42 609 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 C9orf43Q8TAL5 461 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 RNF138Q8WVD3 245 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 TM9SF4Q92544 642 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 UTP4Q969X6 686 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 FAM162AQ96A26 154 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZNF607Q96SK3 696 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 OSBPL11Q9BXB4 747 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 TBL1XR1Q9BZK7 514 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 SACM1LQ9NTJ5 587 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 DEPPQ9NTK1 212 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 SUCOQ9UBS9 1254 aaKnown RBP16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZNF443Q9Y2A4 671 aaPredicted RBP16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 PCDHGB7Q9Y5F8 929 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 HRH3Q9Y5N1 445 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 SNX13Q9Y5W8 968 aa16.47■□□□□ 0.23
TRAPPC4-203ENST00000447216 CDK2AP1O14519 115 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 OIP5O43482 229 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 PDE9AO76083 593 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 MFN2O95140 757 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 DBIP07108 87 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 SP1P08047 785 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 NGFRP08138 427 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 IL7RP16871 459 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 ATP6V1B2P21281 511 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 DNASE1L1P49184 302 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 GAS1P54826 345 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 BNIP2Q12982 314 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 CD226Q15762 336 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 FXNQ16595 210 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 NDUFAF6Q330K2 333 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZNF766Q5HY98 468 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 SLC25A25Q6KCM7 469 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 IGFL3Q6UXB1 125 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 ZNF836Q6ZNA1 936 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 PTRH1Q86Y79 214 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 ARMC8Q8IUR7 673 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 SMYD1Q8NB12 490 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 WDR60Q8WVS4 1066 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 C5orf34Q96MH7 638 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 SECISBP2Q96T21 854 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 CACYBPQ9HB71 228 aaKnown RBP16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 CNIH4Q9P003 139 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 SEC14L3Q9UDX4 400 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 SLC7A8Q9UHI5 535 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 MAGEL2Q9UJ55 1249 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 ABCG2Q9UNQ0 655 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 DTNAQ9Y4J8 743 aa16.46■□□□□ 0.23
TRAPPC4-203ENST00000447216 SERINC4A6NH21 518 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 ALG1L2C9J202 215 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 ANKRD65E5RJM6 399 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 RRP9O43818 475 aaKnown RBP16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 TPST1O60507 370 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 BCAS1O75363 584 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 GMNNO75496 209 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 ANGPTL1O95841 491 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 PABPC4LP0CB38 370 aaKnown RBP16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 CD46P15529 392 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 CLK3P49761 638 aaKnown RBP16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 TRIM25Q14258 630 aaKnown RBP16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 INPP5JQ15735 1006 aaPredicted RBP16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 GLIPR1L2Q4G1C9 344 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 CYBRD1Q53TN4 286 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 ZNF311Q5JNZ3 666 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 FNDC7Q5VTL7 733 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 CYP2R1Q6VVX0 501 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 GALNTL5Q7Z4T8 443 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 OR10Q1Q8NGQ4 319 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 PHOSPHO1Q8TCT1 267 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 SLC26A7Q8TE54 656 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 PMM1Q92871 262 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 ARSGQ96EG1 525 aa16.45■□□□□ 0.22
TRAPPC4-203ENST00000447216 SCMH1Q96GD3 660 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms