RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 KMT2EQ8IZD2 1858 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 OR2W5A6NFC9 320 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF98A6NK75 572 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 TGFBR3LH3BV60 316 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 SEC14L2O76054 403 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 CST1P01037 141 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 IFNA16P05015 189 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 HBQ1P09105 142 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 SOX18P35713 384 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 MGAT2Q10469 447 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 VTCN1Q7Z7D3 282 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 KRT73Q86Y46 540 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 ZDHHC21Q8IVQ6 265 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 RAB2BQ8WUD1 216 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 SLC9A6Q92581 669 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF607Q96SK3 696 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 PRRX2Q99811 253 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 TREX2Q9BQ50 279 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-201ENST00000442201 IL1RAPQ9NPH3 570 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 MKKSQ9NPJ1 570 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-201ENST00000442201 RXFP3Q9NSD7 469 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 DNAJB9Q9UBS3 223 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 DTX4Q9Y2E6 619 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 CLDN16Q9Y5I7 305 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 WDFY4Q6ZS81 3184 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 EFCAB7A8K855 629 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 GNGT2O14610 69 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 HYAL3O43820 417 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-201ENST00000442201 KRT8P05787 483 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 CT62P0C5K7 136 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 ITGA2P17301 1181 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 DDOSTP39656 456 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 MAGEA2P43356 314 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 MAN2A2P49641 1150 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 CDH15P55291 814 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 SCRN3Q0VDG4 424 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 RIN1Q13671 783 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 IL11RAQ14626 422 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 MAPK11Q15759 364 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 GPAT3Q53EU6 434 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 RPS26P11Q5JNZ5 115 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-201ENST00000442201 PWWP2BQ6NUJ5 590 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 ZCCHC12Q6PEW1 402 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 C16orf62Q7Z3J2 963 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 CDRT4Q8N9R6 151 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 SLC16A11Q8NCK7 471 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 NECTIN3Q9NQS3 549 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 OCIAD1Q9NX40 245 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 CALML5Q9NZT1 146 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 AKAP7Q9P0M2 348 aaPredicted RBP7.52□□□□□ -1.21
CCDC39-201ENST00000442201 NCDNQ9UBB6 729 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 SPTBP11277 2137 aa7.52□□□□□ -1.21
CCDC39-201ENST00000442201 PRAMEF27A3QJZ7 478 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 SAC3D1A6NKF1 404 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 MAN1A2O60476 641 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 NME6O75414 186 aaPredicted RBP7.51□□□□□ -1.21
CCDC39-201ENST00000442201 TIAF1O95411 115 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 FABP3P05413 133 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 TNNI3P19429 210 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 EXOSC7Q15024 291 aaKnown RBP7.51□□□□□ -1.21
CCDC39-201ENST00000442201 IFI44LQ53G44 452 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 CCDC157Q569K6 752 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 AGAP6Q5VW22 663 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 RSBN1Q5VWQ0 802 aaPredicted RBP7.51□□□□□ -1.21
CCDC39-201ENST00000442201 DGAT2L6Q6ZPD8 337 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 QSOX2Q6ZRP7 698 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 ZBTB49Q6ZSB9 765 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 BBS10Q8TAM1 723 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 SPPL2AQ8TCT8 520 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 DACT3Q96B18 629 aaPredicted RBP7.51□□□□□ -1.21
CCDC39-201ENST00000442201 COL21A1Q96P44 957 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 AGAP4Q96P64 663 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 CDC6Q99741 560 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 C9orf16Q9BUW7 83 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 BCL2L10Q9HD36 194 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 DNAJB5O75953 348 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 SNAPINO95295 136 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 FGF5P12034 268 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 MYF6P23409 242 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 GALNSP34059 522 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF267Q14586 743 aaPredicted RBP7.51□□□□□ -1.21
CCDC39-201ENST00000442201 CSRP2Q16527 193 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 NKAIN1Q4KMZ8 207 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 VWA2Q5GFL6 755 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 PRAMEF8Q5VWM4 474 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 PRAMEF7Q5VXH5 474 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 WDR53Q7Z5U6 358 aaPredicted RBP7.51□□□□□ -1.21
CCDC39-201ENST00000442201 SLC35A4Q96G79 324 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 TRNT1Q96Q11 434 aaKnown RBP7.51□□□□□ -1.21
CCDC39-201ENST00000442201 SPATA5L1Q9BVQ7 753 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 PIGUQ9H490 435 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 COQ10BQ9H8M1 238 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 APMAPQ9HDC9 416 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF639Q9UID6 485 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 OAZ3Q9UMX2 235 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 KCNE3Q9Y6H6 103 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 FRYLO94915 3013 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 ZNF318Q5VUA4 2279 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 A0A0G2JPF8 293 aa7.51□□□□□ -1.21
CCDC39-201ENST00000442201 C4orf47A7E2U8 309 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms