RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SP140LQ9H930 580 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLC25A19Q9HC21 320 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 ZBTB20Q9HC78 741 aaPredicted RBP6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 VPS29Q9UBQ0 182 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 PCDHGB3Q9Y5G1 929 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 U3KQA8 63 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 U3KQV3 271 aa6.87□□□□□ -1.31
CDC42BPA-208ENST00000442054 PIEZO2Q9H5I5 2752 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 MDC1Q14676 2089 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 GABRR3A8MPY1 467 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 C17orf105B2RV13 164 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 MAN1A2O60476 641 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CLEC3AO75596 197 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 UPK1BO75841 260 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 DXOO77932 396 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 PCGF2P35227 344 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CYB561P49447 251 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 XKP51811 444 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 PPP5CP53041 499 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 RAD23AP54725 363 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 GAS1P54826 345 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 FAM53BQ14153 422 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 FLYWCH1Q4VC44 716 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 Q6ZPB1 254 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CPEB2Q7Z5Q1 589 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 WDR53Q7Z5U6 358 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 C1orf52Q8N6N3 182 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 C7orf57Q8NEG2 295 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 HUS1BQ8NHY5 278 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 S100ZQ8WXG8 99 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLC9A6Q92581 669 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 FAM162AQ96A26 154 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 PPCDCQ96CD2 204 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 LRRC46Q96FV0 321 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 TXNDC15Q96J42 360 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 SERINC2Q96SA4 455 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 EBPLQ9BY08 206 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 ADNPQ9H2P0 1102 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 TRIM45Q9H8W5 580 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 AKIRIN1Q9H9L7 192 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 TP53TG5Q9Y2B4 290 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 TMEM184BQ9Y519 407 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 POM121CA8CG34 1229 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 J3QKU1 62 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CLIC1O00299 241 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 SCAMP2O15127 329 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 SEC14L5O43304 696 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 LDB3O75112 727 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 DIRAS1O95057 198 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CDK1P06493 297 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 LAMP1P11279 417 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 NAT1P18440 290 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CSNK2A2P19784 350 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 FOXL2P58012 376 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 NNATQ16517 81 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 TBR1Q16650 682 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 ATAD3BQ5T9A4 648 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 LIPJQ5W064 366 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 FBXO42Q6P3S6 717 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 P2RY8Q86VZ1 359 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 FAM9CQ8IZT9 166 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR7G3Q8NG95 312 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 IPCEF1Q8WWN9 437 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 PELOQ9BRX2 385 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 BRF2Q9HAW0 419 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 LYARQ9NX58 379 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 COQ3Q9NZJ6 369 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 ATP6V1HQ9UI12 483 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 KIF26BQ2KJY2 2108 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 ARRDC5A6NEK1 342 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR2W5A6NFC9 320 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 C5orf58C9J3I9 102 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 NPIPA5E9PKD4 350 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 FFAR1O14842 300 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 PCDH7O60245 1069 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 C21orf33P30042 268 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 MPIP34949 423 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CHI3L1P36222 383 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 LRRC74AQ0VAA2 488 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 RGNQ15493 299 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CCDC190Q86UF4 302 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 C17orf82Q86X59 251 aaPredicted RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 MCEMP1Q8IX19 187 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CYP4Z2PQ8N1L4 340 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 OR56A3Q8NH54 315 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLC38A4Q969I6 547 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 RMND5AQ9H871 391 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 C3orf14Q9HBI5 128 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 SLC6A20Q9NP91 592 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 ATAD3AQ9NVI7 634 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 FAM120CQ9NX05 1096 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 THUMPD1Q9NXG2 353 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 CCDC59Q9P031 241 aaKnown RBP6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 LRFN1Q9P244 771 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 NPIPA1Q9UND3 350 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 SH2B3Q9UQQ2 575 aa6.86□□□□□ -1.31
CDC42BPA-208ENST00000442054 HTR3EA5X5Y0 456 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 AGAP5A6NIR3 686 aa6.85□□□□□ -1.31
CDC42BPA-208ENST00000442054 MAGEB17A8MXT2 336 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms