RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 NUP214P35658 2090 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 C15orf38-AP3S2A0A0A6YYH1 394 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 FIGNL2A6NMB9 653 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 B4DXG7 233 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 E9PLN8 166 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 ZNHIT1O43257 154 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 ZIC3O60481 467 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 LDLRP01130 860 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 C1QCP02747 245 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 HOXD4P09016 255 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 ESRRAP11474 423 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 HOXB9P17482 250 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 DPP4P27487 766 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 ADSLP30566 484 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 HPCAP84074 193 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 STX5Q13190 355 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 ZNF141Q15928 474 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 ZNF630Q2M218 657 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 GLYR1Q49A26 553 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 GXYLT1Q4G148 440 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 PAGE3Q5JUK9 113 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 WIPI1Q5MNZ9 446 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 VASNQ6EMK4 673 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 YRDCQ86U90 279 aaKnown RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 IFNEQ86WN2 208 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 PM20D2Q8IYS1 436 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 PNPT1Q8TCS8 783 aaKnown RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 PHF10Q8WUB8 498 aaKnown RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 C10orf82Q8WW14 230 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 PMM1Q92871 262 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 C1GALT1C1Q96EU7 318 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 TRNT1Q96Q11 434 aaKnown RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 VKORC1Q9BQB6 163 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 SAP130Q9H0E3 1048 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 MED11Q9P086 117 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 SH3BGRL2Q9UJC5 107 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 LEF1Q9UJU2 399 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 MEMO1Q9Y316 297 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 NDUFAF1Q9Y375 327 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 WDR45Q9Y484 360 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 GMEB1Q9Y692 573 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 FLNCQ14315 2725 aa10.74□□□□□ -0.69
HSPG2-206ENST00000439717 RP1L1Q8IWN7 2480 aaPredicted RBP10.74□□□□□ -0.69
HSPG2-206ENST00000439717 ZGRF1Q86YA3 2104 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 SVILO95425 2214 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 A0A087WZY1 265 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 LINC01387J3KSC0 135 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 CLIC1O00299 241 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 ANGPT2O15123 496 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 KIAA0513O60268 411 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 FCMRO60667 390 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 WDR1O75083 606 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 UGT2B17O75795 530 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 SNRPB2P08579 225 aaKnown RBP10.73□□□□□ -0.69
HSPG2-206ENST00000439717 GABRA1P14867 456 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 BMP7P18075 431 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 PPIBP23284 216 aaKnown RBP10.73□□□□□ -0.69
HSPG2-206ENST00000439717 CHMP24386 653 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 PTGER4P35408 488 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 ADH7P40394 386 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 CRATP43155 626 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 MVDP53602 400 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 GFRA1P56159 465 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 CRYZQ08257 329 aaKnown RBP10.73□□□□□ -0.69
HSPG2-206ENST00000439717 FUT5Q11128 374 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 FADDQ13158 208 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 GNA13Q14344 377 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 SF3B4Q15427 424 aaKnown RBP eCLIP10.73□□□□□ -0.692e-8■■■□□ 15.1
HSPG2-206ENST00000439717 GPR68Q15743 365 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 CD226Q15762 336 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 GTDC1Q4AE62 458 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 GPAT3Q53EU6 434 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 EMC4Q5J8M3 183 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 COX20Q5RI15 118 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.73□□□□□ -0.69
HSPG2-206ENST00000439717 TMEM211Q6ICI0 200 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 TYW3Q6IPR3 259 aaKnown RBP10.73□□□□□ -0.69
HSPG2-206ENST00000439717 AAGABQ6PD74 315 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 RPTNQ6XPR3 784 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 LRRC74BQ6ZQY2 392 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 ZNF619Q8N2I2 560 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 DPP10Q8N608 796 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 B4GALNT2Q8NHY0 566 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 ABTB1Q969K4 478 aaPredicted RBP10.73□□□□□ -0.69
HSPG2-206ENST00000439717 DMRTA2Q96SC8 542 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 TIMP4Q99727 224 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 UGT2B28Q9BY64 529 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 PRDM14Q9GZV8 571 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 NSRP1Q9H0G5 558 aaKnown RBP10.73□□□□□ -0.69
HSPG2-206ENST00000439717 SAR1AQ9NR31 198 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 PNPLA3Q9NST1 481 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 P2RX2Q9UBL9 471 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 MKLN1Q9UL63 735 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 CORO2BQ9UQ03 480 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 SLC6A5Q9Y345 797 aa10.73□□□□□ -0.69
HSPG2-206ENST00000439717 NCKAP5O14513 1909 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 TRBV5-3A0A0A0MS03 114 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 NPIPA5A0A0B4J1W7 369 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 PRAMEF27A3QJZ7 478 aa10.72□□□□□ -0.69
HSPG2-206ENST00000439717 TMEM247A6NEH6 219 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms