RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 HMGB4Q8WW32 186 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 ARMC5Q96C12 935 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 GPN1Q9HCN4 374 aaPredicted RBP14.84□□□□□ -0.03
DHFR-201ENST00000439211 NUMA1Q14980 2115 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 TRBV5-4A0A0C4DH59 114 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 RHPN2P1A8MT19 583 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 GPR31O00270 319 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 RFXAPO00287 272 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 PRG2P13727 222 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 XKP51811 444 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 AGFG1P52594 562 aaKnown RBP14.84□□□□□ -0.03
DHFR-201ENST00000439211 PDZK1IP1Q13113 114 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 ZNF697Q5TEC3 545 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 RGS7BPQ6MZT1 257 aaPredicted RBP14.84□□□□□ -0.03
DHFR-201ENST00000439211 ZNF565Q8N9K5 539 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 OR52E4Q8NGH9 312 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 SIGLEC11Q96RL6 698 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 IFT27Q9BW83 186 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 GABARAPL3Q9BY60 117 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 NEUROG3Q9Y4Z2 214 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 ASB4Q9Y574 426 aa14.84□□□□□ -0.03
DHFR-201ENST00000439211 SCN10AQ9Y5Y9 1956 aa14.83□□□□□ -0.03
DHFR-201ENST00000439211 QSOX1O00391 747 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 ABCD4O14678 606 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 PRAMEF2O60811 474 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 IL3P08700 152 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 SMIM6P0DI80 62 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 SLC6A1P30531 599 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 BUD31P41223 144 aaPredicted RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 STAT5AP42229 794 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 IZUMO1Q8IYV9 350 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 HDDC3Q8N4P3 179 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 TNFAIP8L1Q8WVP5 186 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 MRPL48Q96GC5 212 aaKnown RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 TGIF2Q9GZN2 237 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 SLC6A20Q9NP91 592 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 NDUFB11Q9NX14 153 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 YY2O15391 372 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 FPR3P25089 353 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 PITPNBP48739 271 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 SLC3A1Q07837 685 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 SMAD2Q15796 467 aaKnown RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 ST3GAL2Q16842 350 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 RBMS3Q6XE24 437 aaKnown RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 MSANTD1Q6ZTZ1 278 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 OR5J2Q8NH18 312 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 TCEAL7Q9BRU2 100 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 YIPF4Q9BSR8 244 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 H2AFY2Q9P0M6 372 aaPredicted RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 ZNF705EA8MWA4 302 aaPredicted RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 TYRP14679 529 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 ELK1P19419 428 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 CD22P20273 847 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 IDSP22304 550 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 CST5P28325 142 aaPredicted RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 KCNJ5P48544 419 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 EEF1A1P68104 462 aaKnown RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 KCNJ10P78508 379 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 EEF1A2Q05639 463 aaKnown RBP14.83□□□□□ -0.04
DHFR-201ENST00000439211 GGTA1PQ4G0N0 100 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 ZNF628Q5EBL2 1059 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 EEF1A1P5Q5VTE0 462 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 SLC6A19Q695T7 634 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 CAPNS2Q96L46 248 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 NLGN3Q9NZ94 848 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 OR51B4Q9Y5P0 310 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 BRCA2P51587 3418 aa14.83□□□□□ -0.04
DHFR-201ENST00000439211 MEIKINA0A087WXM9 373 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 RAB36O95755 333 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 PPP2R1BP30154 601 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 POU4F2Q12837 409 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 RBMS2Q15434 407 aaKnown RBP14.82□□□□□ -0.04
DHFR-201ENST00000439211 SERPINA12Q8IW75 414 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 ZNF740Q8NDX6 193 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 TCTEX1D2Q8WW35 142 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 TMEM184CQ9NVA4 438 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 ENTPD4Q9Y227 616 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 HBQ1P09105 142 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 RPL3P39023 403 aaKnown RBP14.82□□□□□ -0.04
DHFR-201ENST00000439211 SLC6A12P48065 614 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 DEFB115Q30KQ5 88 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 ARHGAP15Q53QZ3 475 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 LY6G5CQ5SRR4 150 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 GAREM2Q75VX8 874 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 HSD17B13Q7Z5P4 300 aaPredicted RBP14.82□□□□□ -0.04
DHFR-201ENST00000439211 FGD2Q7Z6J4 655 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 FNDC11Q9BVV2 318 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 ZCCHC2Q9C0B9 1178 aaKnown RBP14.82□□□□□ -0.04
DHFR-201ENST00000439211 ANKRD19PQ9H560 264 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 CACYBPQ9HB71 228 aaKnown RBP14.82□□□□□ -0.04
DHFR-201ENST00000439211 PCDHGA2Q9Y5H1 932 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 WNT6Q9Y6F9 365 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 SGK494L7N484 410 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 NME6O75414 186 aaPredicted RBP14.82□□□□□ -0.04
DHFR-201ENST00000439211 CXCL14O95715 111 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 PCGF2P35227 344 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 SNTB1Q13884 538 aaKnown RBP14.82□□□□□ -0.04
DHFR-201ENST00000439211 SLC9A5Q14940 896 aa14.82□□□□□ -0.04
DHFR-201ENST00000439211 MEDAGQ5VYS4 303 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms