RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 CNN1P51911 297 aaKnown RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 SRP54P61011 504 aaKnown RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 ACY1Q03154 408 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 MSLNQ13421 630 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 FASTKQ14296 549 aaKnown RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 MEF2DQ14814 521 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 MPPE1Q53F39 396 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 CT45A2Q5DJT8 189 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLC25A30Q5SVS4 291 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 STEAP1BQ6NZ63 245 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 NUFIP2Q7Z417 695 aaKnown RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 BNIPLQ7Z465 357 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 ITIH5Q86UX2 942 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLC47A2Q86VL8 602 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 C17orf64Q86WR6 236 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 CCDC71Q8IV32 467 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZNRF1Q8ND25 227 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 CCNYQ8ND76 341 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 CHDHQ8NE62 594 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 OR1B1Q8NGR6 318 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 URGCPQ8TCY9 931 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 CDHR1Q96JP9 859 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 RUNDC3BQ96NL0 473 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 ATP6V0BQ99437 205 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 JPH2Q9BR39 696 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 FTHL17Q9BXU8 183 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 OCR1Q9BZK8 76 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 DDX47Q9H0S4 455 aaKnown RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 CARD9Q9H257 536 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 GANQ9H2C0 597 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 PIGVQ9NUD9 493 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 ACOXLQ9NUZ1 547 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 FAM120CQ9NX05 1096 aaKnown RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 DIMT1Q9UNQ2 313 aaKnown RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 STRAPQ9Y3F4 350 aaKnown RBP2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 GREB1Q4ZG55 1949 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 PHLPP2Q6ZVD8 1323 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 CROCCQ5TZA2 2017 aa2.61□□□□□ -1.99
HMGB3P12-201ENST00000438745 ACOD1A6NK06 481 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 M0QZ92 97 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 GALR3O60755 368 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 CSDE1O75534 798 aaKnown RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 BCAS2O75934 225 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 CCNE1P24864 410 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 LMO2P25791 158 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 MARCKSP29966 332 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 HOXA6P31267 233 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 CD52P31358 61 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 TRIM23P36406 574 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 GSK3BP49841 420 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 HNRNPFP52597 415 aaKnown RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 NLRP11P59045 1033 aaKnown RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 RPS4XP62701 263 aaKnown RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZFP36L1Q07352 338 aaKnown RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 HSPA14Q0VDF9 509 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 EMC2Q15006 297 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 EXOSC7Q15024 291 aaKnown RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 CARTPTQ16568 116 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 POM121L1PQ3SYA9 428 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 UNC50Q53HI1 259 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 TCHHL1Q5QJ38 904 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 LEMD1Q68G75 181 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 EMBQ6PCB8 327 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 Q6ZS52 159 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 ADAMTSL2Q86TH1 951 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 NAXDQ8IW45 347 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 PHC2Q8IXK0 858 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 LINC00518Q8N0U6 118 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 LRRC43Q8N309 656 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 FBXL16Q8N461 479 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZNF781Q8N8C0 355 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 SAMD12Q8N8I0 201 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 RTL3Q8N8U3 475 aaKnown RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 TMEM185AQ8NFB2 350 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 OR1K1Q8NGR3 316 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 OR2L2Q8NH16 312 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 SETD7Q8WTS6 366 aaKnown RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 FGF11Q92914 225 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 RAB39BQ96DA2 213 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 NAP1L3Q99457 506 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 HMG20BQ9P0W2 317 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 ERVK-18Q9QC07 812 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 FAM153AQ9UHL3 310 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 TRMT6Q9UJA5 497 aaKnown RBP2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 MOSPD1Q9UJG1 213 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 APPL1Q9UKG1 709 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 CPQQ9Y646 472 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 CELSR3Q9NYQ7 3312 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 TSC2P49815 1807 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 SCN10AQ9Y5Y9 1956 aa2.6□□□□□ -1.99
HMGB3P12-201ENST00000438745 COL6A6A6NMZ7 2263 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SETD2Q9BYW2 2564 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 TLN1Q9Y490 2541 aaKnown RBP2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 MEI4A8MW99 385 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SH2D1BO14796 132 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 PHF1O43189 567 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 BAG2O95816 211 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLC4A1P02730 911 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SMIM10L2AP0DMW4 78 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SMIM10L2BP0DMW5 78 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms