RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 OR4C3Q8NH37 302 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 LINC01560Q8TB33 94 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 ACTRT2Q8TDY3 377 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 ZBTB8AQ96BR9 441 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 MOAP1Q96BY2 351 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 TUBGCP3Q96CW5 907 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 FAM120BQ96EK7 910 aaKnown RBP15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 ZIM3Q96PE6 472 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 PINK1Q9BXM7 581 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 HOXD1Q9GZZ0 328 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 SSU72Q9NP77 194 aaKnown RBP15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 PAQR5Q9NXK6 330 aaPredicted RBP15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 ST6GALNAC2Q9UJ37 374 aa15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 FAF1Q9UNN5 650 aaPredicted RBP15.83■□□□□ 0.12
SBDSP1-203ENST00000437201 DOCK7Q96N67 2140 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 BIRC5O15392 142 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 SEC14L5O43304 696 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 SKAP2O75563 359 aaPredicted RBP15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 TNFSF13O75888 250 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 HMGN2P05204 90 aaKnown RBP15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 LAMP1P11279 417 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 ATP6V1C1P21283 382 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 ETV4P43268 484 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 CCT3P49368 545 aaKnown RBP15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 ZNF41P51814 821 aaPredicted RBP15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 IST1P53990 364 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 PTGR1Q14914 329 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 SGCBQ16585 318 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 SMU1Q2TAY7 513 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 SPDYE7PQ495Y7 208 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 FIGNL1Q6PIW4 674 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 APOOLQ6UXV4 268 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 CDC20BQ86Y33 519 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 WDR75Q8IWA0 830 aaKnown RBP15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 ZNF527Q8NB42 609 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 CHDHQ8NE62 594 aaPredicted RBP15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 PSMA8Q8TAA3 256 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 FBXO30Q8TB52 745 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 COQ8BQ96D53 544 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 C16orf58Q96GQ5 468 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 C3orf30Q96M34 536 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 FOXC2Q99958 501 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 SLC39A3Q9BRY0 314 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 C1orf50Q9BV19 199 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 ACTRT3Q9BYD9 372 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 BHLHE41Q9C0J9 482 aaPredicted RBP15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 PIGUQ9H490 435 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 NEUROD4Q9HD90 331 aa15.82■□□□□ 0.12
SBDSP1-203ENST00000437201 AKAP9Q99996 3911 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 A0A1W2PQD3 144 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 TM9SF1O15321 606 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 SMNDC1O75940 238 aaKnown RBP eCLIP15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 TUBBP07437 444 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 CREB1P16220 341 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 EFNA1P20827 205 aaPredicted RBP15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 SUCLG1P53597 346 aaKnown RBP15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 EMX2Q04743 252 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 TP53BP2Q13625 1128 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 LASP1Q14847 261 aaKnown RBP15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 PON3Q15166 354 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 TMEM44Q2T9K0 475 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 CDC73Q6P1J9 531 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 PLXDC2Q6UX71 529 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 CAMKMTQ7Z624 323 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 CROCCP2Q86T23 111 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 METTL25Q8N6Q8 603 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 OR5M1Q8NGP8 315 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 ADAMTS15Q8TE58 950 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 SMPDL3BQ92485 455 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 NRGNQ92686 78 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 STARD4Q96DR4 205 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 RNF122Q9H9V4 155 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 KIAA1549Q9HCM3 1950 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 SIRT3Q9NTG7 399 aaPredicted RBP15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 NOP53Q9NZM5 478 aaKnown RBP15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 GIMAP2Q9UG22 337 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 VDAC3Q9Y277 283 aa15.81■□□□□ 0.12
SBDSP1-203ENST00000437201 SPG11Q96JI7 2443 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 MED12Q93074 2177 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 C7orf72A4D263 438 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 SH3D21A4FU49 640 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 H3BNH8 94 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 CFLARO15519 480 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 GMFGO60234 142 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 SERPINE1P05121 402 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 MYZAPP0CAP1 466 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 ME2P23368 584 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 CPOXP36551 454 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 CLDN15P56746 228 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 CLDN20P56880 219 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 C21orf58P58505 322 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 EXOSC6Q5RKV6 272 aaKnown RBP15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 PDSS1Q5T2R2 415 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 MTERF4Q7Z6M4 381 aaKnown RBP15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 GALNT10Q86SR1 603 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 GTPBP8Q8N3Z3 284 aaPredicted RBP15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 SFXN5Q8TD22 340 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 FIG4Q92562 907 aa15.8■□□□□ 0.12
SBDSP1-203ENST00000437201 PGM2Q96G03 612 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms