RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PRODHO43272 600 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 AKR7A3O95154 331 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 RLN1P04808 185 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 NOS3P29474 1203 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 PTGER1P34995 402 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 TRIM23P36406 574 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 RPL19P84098 196 aaKnown RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 ANXA8L1Q5VT79 327 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 HBMQ6B0K9 141 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 RNF44Q7L0R7 432 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 HSD17B13Q7Z5P4 300 aaPredicted RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 VRK3Q8IV63 474 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF683Q8IZ20 524 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 ARIH2OSQ8N7S6 290 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 KCT2Q8NC54 265 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 GPR32P1Q8NGA4 272 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 POLDIP3Q9BY77 421 aaKnown RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 DDX31Q9H8H2 851 aaKnown RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 BABAM2Q9NXR7 383 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 SULT1B1O43704 296 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 TGFB1P01137 390 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 TBXA2RP21731 343 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 CCR4P51679 360 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 SP140Q13342 867 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 NAE1Q13564 534 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 ATXN7L3Q14CW9 347 aaPredicted RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 HECTD3Q5T447 861 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 PLBD1Q6P4A8 553 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 PUSL1Q8N0Z8 303 aaKnown RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 KLHL36Q8N4N3 616 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 MGME1Q9BQP7 344 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 FNDC11Q9BVV2 318 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM138Q9NPI0 162 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 PRMT8Q9NR22 394 aaPredicted RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 MIOXQ9UGB7 285 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 NOSIPQ9Y314 301 aaKnown RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 SLC2A10O95528 541 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 RPS13P62277 151 aaKnown RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 PRR5P85299 388 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 GPRC6AQ5T6X5 926 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 PRAMEF13Q5VWM6 474 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 CFAP206Q8IYR0 622 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 PXT1Q8NFP0 134 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 OR5T2Q8NGG2 359 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 PEX11GQ96HA9 241 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 MS4A4AQ96JQ5 239 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 GAS2L1Q99501 681 aaPredicted RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 RSPO3Q9BXY4 272 aaPredicted RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 IL20Q9NYY1 176 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 C5AR2Q9P296 337 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 SEC14L3Q9UDX4 400 aa7□□□□□ -1.29
CPSF6-202ENST00000435070 MBD1Q9UIS9 605 aaPredicted RBP7□□□□□ -1.29
CPSF6-202ENST00000435070 PARP14Q460N5 1801 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 KCNE1BA0A087WTH5 132 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 OR6C68A6NDL8 312 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 FRS3O43559 492 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF155Q12901 538 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TUSC3Q13454 348 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 APOOLQ6UXV4 268 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 RPTNQ6XPR3 784 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 OR11G2Q8NGC1 345 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 PPCDCQ96CD2 204 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 MRPL48Q96GC5 212 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 RDH14Q9HBH5 336 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 COMMD9Q9P000 198 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 BTNL2Q9UIR0 455 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ANKRD31Q8N7Z5 1873 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 GLTPD2A6NH11 291 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TUBAL3A6NHL2 446 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 LRRN3E7EW58 273 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 KHDRBS3O75525 346 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 CRYBA1P05813 215 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 RB1P06400 928 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 PTBP1P26599 531 aaKnown RBP eCLIP6.99□□□□□ -1.294e-9■■■■□ 19.3
CPSF6-202ENST00000435070 YBEYP58557 167 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 RAB2AP61019 212 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 RAB40BQ12829 278 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 POM121L1PQ3SYA9 428 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF660Q6AZW8 331 aaPredicted RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 SLC36A4Q6YBV0 504 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 CDH26Q8IXH8 852 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 PCSK9Q8NBP7 692 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ATAD1Q8NBU5 361 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ARMC5Q96C12 935 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ORAI1Q96D31 301 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 TMEM19Q96HH6 336 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 C10orf90Q96M02 699 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 PHB2Q99623 299 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 AIF1LQ9BQI0 150 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 SMG9Q9H0W8 520 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 LRRN3Q9H3W5 708 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 IL26Q9NPH9 171 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 NDRG3Q9UGV2 375 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 EXOSC1Q9Y3B2 195 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 SOCS6O14544 535 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 NARSO43776 548 aaKnown RBP6.99□□□□□ -1.29
CPSF6-202ENST00000435070 OR6A2O95222 327 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 LY86O95711 162 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 ZNF35P13682 527 aa6.99□□□□□ -1.29
CPSF6-202ENST00000435070 PSMB1P20618 241 aaKnown RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms