RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 KATNBL1Q9H079 304 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 SSU72Q9NP77 194 aaKnown RBP11.41□□□□□ -0.58
UBE3B-203ENST00000434735 MTMR10Q9NXD2 777 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 ZNF226Q9NYT6 803 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 BLACEA4D250 179 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 AP1G1O43747 822 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 TSPAN12O95859 305 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 COL9A1P20849 921 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 BCKDHBP21953 392 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 TAS2R43P59537 309 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 DCAF7P61962 342 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 THAP4Q8WY91 577 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 C16orf58Q96GQ5 468 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 CITED4Q96RK1 184 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 NXF5Q9H1B4 397 aaKnown RBP11.41□□□□□ -0.58
UBE3B-203ENST00000434735 ICKQ9UPZ9 632 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 PCDHGB6Q9Y5F9 930 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 CEP290O15078 2479 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 C13orf42A0A1B0GVH6 325 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 ANTXRLA6NF34 631 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 CD1CP29017 333 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 OR4D1Q15615 310 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 LEG1Q6P5S2 330 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 GNPDA2Q8TDQ7 276 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 APOBEC4Q8WW27 367 aaKnown RBP11.41□□□□□ -0.58
UBE3B-203ENST00000434735 SLC39A13Q96H72 371 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 MAPKAP1Q9BPZ7 522 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 OR14J1Q9UGF5 321 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 ENPP1P22413 925 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 RPS3P23396 243 aaKnown RBP eCLIP11.41□□□□□ -0.58
UBE3B-203ENST00000434735 MFSD9Q8NBP5 474 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 ST7LQ8TDW4 575 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 METTL2AQ96IZ6 378 aaKnown RBP11.41□□□□□ -0.58
UBE3B-203ENST00000434735 PINK1Q9BXM7 581 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 NRSN2Q9GZP1 204 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 MTHFD2LQ9H903 347 aaPredicted RBP11.41□□□□□ -0.58
UBE3B-203ENST00000434735 OLAHQ9NV23 265 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 KCNIP3Q9Y2W7 256 aa11.41□□□□□ -0.58
UBE3B-203ENST00000434735 PLRG1O43660 514 aaKnown RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 PSKH1P11801 424 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 GRK1Q15835 563 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 SLC14A2Q15849 920 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 GLT8D1Q68CQ7 371 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 ZFAND4Q86XD8 727 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 BANPQ8N9N5 519 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 ELP5Q8TE02 316 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 BORCS6Q96GS4 357 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 DMRT3Q9NQL9 472 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 CARD8Q9Y2G2 431 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 NOP16Q9Y3C1 178 aaKnown RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 TEX264Q9Y6I9 313 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 TRAV17A0A0B4J275 112 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 ZNF99A8MXY4 864 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 BHMG1C9JSJ3 638 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 HLA-DPB1P04440 258 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 HIST1H1TP22492 207 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 FDXRP22570 491 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 DNAJB1P25685 340 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 CD68P34810 354 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 RBMXP38159 391 aaKnown RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 SLC26A5P58743 744 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 CCNJQ5T5M9 372 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 HACD2Q6Y1H2 254 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 SCGB1C1Q8TD33 95 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 OSTF1Q92882 214 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 CDS1Q92903 461 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 WBP2Q969T9 261 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 SCP2D1Q9UJQ7 156 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 ZNF175Q9Y473 711 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 CNOT4O95628 575 aaKnown RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 PDGFBP01127 241 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 CD3GP09693 182 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 GKN3PP0CG01 181 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 CPMP14384 443 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 GPR4P46093 362 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 ACADVLP49748 655 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 KCNC4Q03721 635 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 ZNF750Q32MQ0 723 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 CHRFAM7AQ494W8 412 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 TMEM92Q6UXU6 159 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 SPRED2Q7Z698 418 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 TMED4Q7Z7H5 227 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 PLD6Q8N2A8 252 aaKnown RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 METTL25Q8N6Q8 603 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 OR11G2Q8NGC1 345 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 STT3BQ8TCJ2 826 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 ZNF69Q9UC07 566 aa11.4□□□□□ -0.58
UBE3B-203ENST00000434735 INTS6Q9UL03 887 aaKnown RBP11.4□□□□□ -0.58
UBE3B-203ENST00000434735 A0A1W2PQ09 198 aa11.4□□□□□ -0.59
UBE3B-203ENST00000434735 M0R1B8 84 aa11.4□□□□□ -0.59
UBE3B-203ENST00000434735 LHCGRP22888 699 aa11.4□□□□□ -0.59
UBE3B-203ENST00000434735 IGFBP6P24592 240 aaPredicted RBP11.4□□□□□ -0.59
UBE3B-203ENST00000434735 C6orf136Q5SQH8 315 aa11.4□□□□□ -0.59
UBE3B-203ENST00000434735 FAM199XQ6PEV8 388 aaPredicted RBP11.4□□□□□ -0.59
UBE3B-203ENST00000434735 OR5M1Q8NGP8 315 aa11.4□□□□□ -0.59
UBE3B-203ENST00000434735 CIDECQ96AQ7 238 aaPredicted RBP11.4□□□□□ -0.59
UBE3B-203ENST00000434735 S100A16Q96FQ6 103 aaKnown RBP11.4□□□□□ -0.59
UBE3B-203ENST00000434735 GDF15Q99988 308 aa11.4□□□□□ -0.59
UBE3B-203ENST00000434735 MND1Q9BWT6 205 aa11.4□□□□□ -0.59
UBE3B-203ENST00000434735 GSKIPQ9P0R6 139 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms