RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 OR56A3Q8NH54 315 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 OR5P2Q8WZ92 322 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 FGF11Q92914 225 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 WBP1Q96G27 269 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 NPAS1Q99742 590 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 GINS4Q9BRT9 223 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 EQTNQ9NQ60 294 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 GMEB2Q9UKD1 530 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 AK6Q9Y3D8 172 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF175Q9Y473 711 aa10.81□□□□□ -0.68
HMGCS1-202ENST00000433297 DOCK3Q8IZD9 2030 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 INPPL1O15357 1258 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 KHDRBS3O75525 346 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 SLCO2B1O94956 709 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 PTHLHP12272 177 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 ANXA7P20073 488 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 RAB3AP20336 220 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 RAB3BP20337 219 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 IFNGR2P38484 337 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 SNRPD1P62314 119 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 LASP1Q14847 261 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF697Q5TEC3 545 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 AADACL4Q5VUY2 407 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 FCRLBQ6BAA4 426 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 TRMT11Q7Z4G4 463 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 ABHD4Q8TB40 342 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.682e-31■■□□□ 14.5
HMGCS1-202ENST00000433297 ALG14Q96F25 216 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 SAMD8Q96LT4 415 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 NRTNQ99748 197 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 DPYSL5Q9BPU6 564 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 DPH7Q9BTV6 452 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 TRIM36Q9NQ86 728 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 NUMA1Q14980 2115 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 OTOFQ9HC10 1997 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 IGLV3-16A0A075B6K0 115 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 SURF4O15260 269 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 MAGEB4O15481 346 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 NDUFA2O43678 99 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 ERAL1O75616 437 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 RP2O75695 350 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 CCR8P51685 355 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 B2MP61769 119 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 PITPNAQ00169 270 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 LGALS3BPQ08380 585 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 IKZF1Q13422 519 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 ACSM3Q53FZ2 586 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 TMEM255AQ5JRV8 349 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 KIAA1211LQ6NV74 962 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 FUT10Q6P4F1 479 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 HSD11B1LQ7Z5J1 315 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 TMEM173Q86WV6 379 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 NKAIN4Q8IVV8 208 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 NRMQ8IXM6 262 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 OR52N1Q8NH53 320 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 ZG16BQ96DA0 208 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 MS4A4AQ96JQ5 239 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC35G5Q96KT7 338 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 PRRC1Q96M27 445 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 EFCAB11Q9BUY7 163 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 ACTR6Q9GZN1 396 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 MTG2Q9H4K7 406 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 SCPEP1Q9HB40 452 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 ACAD8Q9UKU7 415 aa10.8□□□□□ -0.68
HMGCS1-202ENST00000433297 ZNF98A6NK75 572 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 FAM74A7A6NL05 159 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 PIP5K1CO60331 668 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 UBL3O95164 117 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 FUT1P19526 365 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 BMP8BP34820 402 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 RNF144AP50876 292 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 UBE2MP61081 183 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 LMAN2Q12907 356 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 EIF2B5Q13144 721 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 FAM110CQ1W6H9 321 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 FAM74A3Q4VXF1 159 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 SLC22A10Q63ZE4 541 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 APOOLQ6UXV4 268 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 BMP8AQ7Z5Y6 402 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 C17orf47Q8NEP4 570 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 FBXO22Q8NEZ5 403 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 OR51Q1Q8NH59 317 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 SORCS1Q8WY21 1168 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 ORAI1Q96D31 301 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 USB1Q9BQ65 265 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 SARGQ9BW04 601 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 SEMA4GQ9NTN9 838 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 GLS2Q9UI32 602 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 BACE2Q9Y5Z0 518 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 H0YC42 278 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 FMO6PO60774 539 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 PYCR1P32322 319 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 CBX5P45973 191 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 MAPK8P45983 427 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 GCGRP47871 477 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 ERVK-25P63136 954 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 TSPAN31Q12999 210 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 HLXQ14774 488 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 TXNDC8Q6A555 127 aa10.79□□□□□ -0.68
HMGCS1-202ENST00000433297 CD300LDQ6UXZ3 194 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms