RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 GPC1P35052 558 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 ETV4P43268 484 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 CPA2P48052 419 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 PRIM2P49643 509 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 NAA20P61599 178 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 PSPHP78330 225 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 GANABQ14697 944 aaKnown RBP10.59□□□□□ -0.71
HDAC4-202ENST00000430200 PON3Q15166 354 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 BCL2A1Q16548 175 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 PLPPR5Q32ZL2 321 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.59□□□□□ -0.71
HDAC4-202ENST00000430200 OLIG3Q7RTU3 272 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 ZNF550Q7Z398 422 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 TGIF2LYQ8IUE0 185 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 CNEP1R1Q8N9A8 125 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 WFDC11Q8NEX6 87 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 CDS1Q92903 461 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 SH3YL1Q96HL8 342 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-202ENST00000430200 METTL2AQ96IZ6 378 aaKnown RBP10.59□□□□□ -0.71
HDAC4-202ENST00000430200 HS3ST6Q96QI5 342 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 TRMOQ9BU70 441 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 TMEM185BQ9H7F4 350 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 CXorf36Q9H7Y0 433 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 KLHL28Q9NXS3 571 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 C6orf203Q9P0P8 240 aaPredicted RBP10.59□□□□□ -0.71
HDAC4-202ENST00000430200 SH3BP4Q9P0V3 963 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 ZDHHC2Q9UIJ5 367 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 CLEC4AQ9UMR7 237 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 WBP11Q9Y2W2 641 aaKnown RBP10.59□□□□□ -0.71
HDAC4-202ENST00000430200 TRAF6Q9Y4K3 522 aa10.59□□□□□ -0.71
HDAC4-202ENST00000430200 ANK3Q12955 4377 aaKnown RBP10.58□□□□□ -0.72
HDAC4-202ENST00000430200 FN1P02751 2386 aaKnown RBP10.58□□□□□ -0.72
HDAC4-202ENST00000430200 ALG1L2C9J202 215 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 ITM2AO43736 263 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 PEX11AO75192 247 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 HMGN2P05204 90 aaKnown RBP10.58□□□□□ -0.72
HDAC4-202ENST00000430200 FGF4P08620 206 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 PEPDP12955 493 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 NID1P14543 1247 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 CD53P19397 219 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 KLK2P20151 261 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 GCKP35557 465 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 ADAM8P78325 824 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 LASP1Q14847 261 aaKnown RBP10.58□□□□□ -0.72
HDAC4-202ENST00000430200 SF3B4Q15427 424 aaKnown RBP eCLIP10.58□□□□□ -0.721e-6■■■■□ 22.7
HDAC4-202ENST00000430200 ZNHIT3Q15649 155 aaPredicted RBP10.58□□□□□ -0.72
HDAC4-202ENST00000430200 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.58□□□□□ -0.72
HDAC4-202ENST00000430200 KIF18BQ86Y91 864 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 RIMKLAQ8IXN7 391 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 CLEC4FQ8N1N0 589 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 METTL25Q8N6Q8 603 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 CDRT4Q8N9R6 151 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 ZBED6CLQ96FA7 236 aaPredicted RBP10.58□□□□□ -0.72
HDAC4-202ENST00000430200 RNF145Q96MT1 663 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 TBL1XR1Q9BZK7 514 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 C20orf27Q9GZN8 174 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 GSX1Q9H4S2 264 aaPredicted RBP10.58□□□□□ -0.72
HDAC4-202ENST00000430200 ACSS1Q9NUB1 689 aaPredicted RBP10.58□□□□□ -0.72
HDAC4-202ENST00000430200 GPATCH2Q9NW75 528 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 GIN1Q9NXP7 522 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 ATP6V1HQ9UI12 483 aa10.58□□□□□ -0.72
HDAC4-202ENST00000430200 CR1P17927 2039 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 A0A1W2PRB8 838 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 MSTNO14793 375 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 EMC8O43402 210 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 EFNA2O43921 213 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 KCNH1O95259 989 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 SLU7O95391 586 aaKnown RBP10.57□□□□□ -0.72
HDAC4-202ENST00000430200 C6orf47O95873 294 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 RAF1P04049 648 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 NGFRP08138 427 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 PEX19P40855 299 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 MANFP55145 182 aaKnown RBP10.57□□□□□ -0.72
HDAC4-202ENST00000430200 RPS26P62854 115 aaKnown RBP10.57□□□□□ -0.72
HDAC4-202ENST00000430200 ZNF117Q03924 483 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 FOXF1Q12946 379 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 C6orf136Q5SQH8 315 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 CBLN3Q6UW01 205 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 P4HA3Q7Z4N8 544 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 CXorf67Q86X51 503 aaPredicted RBP10.57□□□□□ -0.72
HDAC4-202ENST00000430200 RIBC1Q8N443 379 aaPredicted RBP10.57□□□□□ -0.72
HDAC4-202ENST00000430200 MEIOBQ8N635 442 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 OR5AK3PQ8NH89 298 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 JADE3Q92613 823 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 MBD6Q96DN6 1003 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 WFIKKN1Q96NZ8 548 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 ALPK1Q96QP1 1244 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 SMR3AQ99954 134 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 PIGMQ9H3S5 423 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 ZCCHC3Q9NUD5 404 aaKnown RBP10.57□□□□□ -0.72
HDAC4-202ENST00000430200 MED17Q9NVC6 651 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 MID2Q9UJV3 735 aa10.57□□□□□ -0.72
HDAC4-202ENST00000430200 A0A0J9YW62 118 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 NPIPB9F8W1W9 429 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 EIF1AYO14602 144 aaKnown RBP10.56□□□□□ -0.72
HDAC4-202ENST00000430200 CTIFO43310 598 aaKnown RBP10.56□□□□□ -0.72
HDAC4-202ENST00000430200 TNFRSF21O75509 655 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 THBDP07204 575 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 BPGMP07738 259 aa10.56□□□□□ -0.72
HDAC4-202ENST00000430200 LINGO3P0C6S8 592 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms