RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 CBX6O95503 412 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 NUDT14O95848 222 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 ABOP16442 354 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 LCN1P31025 176 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 UQCRFS1P47985 274 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 MVDP53602 400 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 TXNL4AP83876 142 aaKnown RBP13.28□□□□□ -0.28
SGCE-204ENST00000428696 RBPJQ06330 500 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 GNA13Q14344 377 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 TRMT5Q32P41 509 aaKnown RBP13.28□□□□□ -0.28
SGCE-204ENST00000428696 KLHL26Q53HC5 615 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 WIPI1Q5MNZ9 446 aaPredicted RBP13.28□□□□□ -0.28
SGCE-204ENST00000428696 GCNT6Q5T4J0 391 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 FNDC7Q5VTL7 733 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 ZNF324BQ6AW86 544 aaPredicted RBP13.28□□□□□ -0.28
SGCE-204ENST00000428696 HEPHL1Q6MZM0 1159 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 SIAH3Q8IW03 269 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 GHDCQ8N2G8 530 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 TMCO5AQ8N6Q1 288 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 GALNT11Q8NCW6 608 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 BCAS4Q8TDM0 211 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 SLC38A5Q8WUX1 472 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 LRRC58Q96CX6 371 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 ANKRD27Q96NW4 1050 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 TRNT1Q96Q11 434 aaKnown RBP13.28□□□□□ -0.28
SGCE-204ENST00000428696 SLX1AQ9BQ83 275 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 ECSITQ9BQ95 431 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 SLC6A15Q9H2J7 730 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 IKZF5Q9H5V7 419 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 PTGES2Q9H7Z7 377 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 EFCAB1Q9HAE3 211 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 ALKBH4Q9NXW9 302 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 TNFRSF10DQ9UBN6 386 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 CARD8Q9Y2G2 431 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 DTNAQ9Y4J8 743 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 NINQ8N4C6 2090 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 C15orf38-AP3S2A0A0A6YYH1 394 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 TRGV5A0A0B4J1U4 118 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 PRAMEF27A3QJZ7 478 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 NPIPA2E9PIF3 369 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 NPIPA3F8WFD2 350 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 CHRM4P08173 479 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 TFPTP0C1Z6 253 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 DPP4P27487 766 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 GAS1P54826 345 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 FUT5Q11128 374 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 FADDQ13158 208 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 SELPLGQ14242 412 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 NDUFAF6Q330K2 333 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 EIPR1Q53HC9 387 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 RPS26P11Q5JNZ5 115 aaPredicted RBP13.27□□□□□ -0.29
SGCE-204ENST00000428696 TYW3Q6IPR3 259 aaKnown RBP13.27□□□□□ -0.29
SGCE-204ENST00000428696 NANOGP8Q6NSW7 305 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 TMEM81Q6P7N7 255 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 ZNF619Q8N2I2 560 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 ANKS4BQ8N8V4 417 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 ST6GALNAC3Q8NDV1 305 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 NFKBIDQ8NI38 313 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 ZG16BQ96DA0 208 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 TMEM19Q96HH6 336 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 BARD1Q99728 777 aaKnown RBP13.27□□□□□ -0.29
SGCE-204ENST00000428696 SH3GL1Q99961 368 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 CPPED1Q9BRF8 314 aaPredicted RBP13.27□□□□□ -0.29
SGCE-204ENST00000428696 ZNF350Q9GZX5 532 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 MYLK2Q9H1R3 596 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 ZNF703Q9H7S9 590 aaPredicted RBP13.27□□□□□ -0.29
SGCE-204ENST00000428696 MTHFD2LQ9H903 347 aaPredicted RBP13.27□□□□□ -0.29
SGCE-204ENST00000428696 NANOGQ9H9S0 305 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 THUMPD1Q9NXG2 353 aaKnown RBP13.27□□□□□ -0.29
SGCE-204ENST00000428696 TAS2R10Q9NYW0 307 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 ACAD8Q9UKU7 415 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 HRH3Q9Y5N1 445 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 LIPGQ9Y5X9 500 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 EML6Q6ZMW3 1958 aa13.27□□□□□ -0.29
SGCE-204ENST00000428696 TRGV8A0A0C4DH27 118 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 ALG1L2C9J202 215 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 FAM47E-STBD1D6RA91 191 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 TNFRSF21O75509 655 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 UGT2B17O75795 530 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 ZIC2O95409 532 aaPredicted RBP13.26□□□□□ -0.29
SGCE-204ENST00000428696 CSTAP01040 98 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 IL7RP16871 459 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 HOXB9P17482 250 aaPredicted RBP13.26□□□□□ -0.29
SGCE-204ENST00000428696 AQP1P29972 269 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 PTGS2P35354 604 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 GCKP35557 465 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 MAGEA8P43361 318 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 CPA2P48052 419 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 NUDT2P50583 147 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 CCR4P51679 360 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 CRISP3P54108 245 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 CD226Q15762 336 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 MAPK14Q16539 360 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 RABL3Q5HYI8 236 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 BNC2Q6ZN30 1099 aaPredicted RBP13.26□□□□□ -0.29
SGCE-204ENST00000428696 LRRC74BQ6ZQY2 392 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 PEX5LQ8IYB4 626 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 FAM83FQ8NEG4 500 aaPredicted RBP13.26□□□□□ -0.29
SGCE-204ENST00000428696 OR2M3Q8NG83 312 aa13.26□□□□□ -0.29
SGCE-204ENST00000428696 OR5M9Q8NGP3 310 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms