RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 CASKO14936 926 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 KCNK2O95069 426 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 KCNH1O95259 989 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 CD8BP10966 210 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 CRYGSP22914 178 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 PSMA4P25789 261 aaKnown RBP13.93□□□□□ -0.18
SEC13-210ENST00000428626 ARRB2P32121 409 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 EEFSECP57772 596 aaKnown RBP13.93□□□□□ -0.18
SEC13-210ENST00000428626 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.93□□□□□ -0.18
SEC13-210ENST00000428626 ANKRD34AQ69YU3 496 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 MFSD12Q6NUT3 480 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 RNF165Q6ZSG1 346 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 Q71RC1 249 aaPredicted RBP13.93□□□□□ -0.18
SEC13-210ENST00000428626 OR2W6PQ8NHA6 318 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 POC1BQ8TC44 478 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 PPCDCQ96CD2 204 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 NEUROD4Q9HD90 331 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 BEX4Q9NWD9 120 aaPredicted RBP13.93□□□□□ -0.18
SEC13-210ENST00000428626 SH3BP4Q9P0V3 963 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 MRTO4Q9UKD2 239 aaKnown RBP13.93□□□□□ -0.18
SEC13-210ENST00000428626 CLEC4AQ9UMR7 237 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 EIF3LQ9Y262 564 aaKnown RBP13.93□□□□□ -0.18
SEC13-210ENST00000428626 AP4B1Q9Y6B7 739 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 DSCAMO60469 2012 aa13.93□□□□□ -0.18
SEC13-210ENST00000428626 ZANQ9Y493 2812 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 TTC36A6NLP5 189 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 EIF1AYO14602 144 aaKnown RBP13.92□□□□□ -0.18
SEC13-210ENST00000428626 RGS14O43566 566 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 THBDP07204 575 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 BCKDHAP12694 445 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 POU2F1P14859 743 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 IL11P20809 199 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 GPC1P35052 558 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 CLK3P49761 638 aaKnown RBP13.92□□□□□ -0.18
SEC13-210ENST00000428626 PSMD4P55036 377 aaKnown RBP13.92□□□□□ -0.18
SEC13-210ENST00000428626 MANFP55145 182 aaKnown RBP13.92□□□□□ -0.18
SEC13-210ENST00000428626 NKX6-1P78426 367 aaPredicted RBP13.92□□□□□ -0.18
SEC13-210ENST00000428626 CD226Q15762 336 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 GALNTL6Q49A17 601 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 CCNJQ5T5M9 372 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 EIF1ADQ8N9N8 165 aaKnown RBP13.92□□□□□ -0.18
SEC13-210ENST00000428626 CDRT4Q8N9R6 151 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 FAM120BQ96EK7 910 aaKnown RBP13.92□□□□□ -0.18
SEC13-210ENST00000428626 ZBED6CLQ96FA7 236 aaPredicted RBP13.92□□□□□ -0.18
SEC13-210ENST00000428626 PIK3IP1Q96FE7 263 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 ZC3HAV1LQ96H79 300 aaKnown RBP13.92□□□□□ -0.18
SEC13-210ENST00000428626 MED18Q9BUE0 208 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 MECRQ9BV79 373 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 C3orf14Q9HBI5 128 aa13.92□□□□□ -0.18
SEC13-210ENST00000428626 CSPG4Q6UVK1 2322 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 FREM1Q5H8C1 2179 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 A0A1W2PRB8 838 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 C16orf97H3BN30 126 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 PIP5K1BO14986 540 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 OIP5O43482 229 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 NDUFB5O43674 189 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 TRIM13O60858 407 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 NGFRP08138 427 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 TBXA2RP21731 343 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 SHC1P29353 583 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 ALDH3A1P30838 453 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 EIF1AXP47813 144 aaKnown RBP13.91□□□□□ -0.18
SEC13-210ENST00000428626 RNF144AP50876 292 aaPredicted RBP13.91□□□□□ -0.18
SEC13-210ENST00000428626 OCRLQ01968 901 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 PLPPR5Q32ZL2 321 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 FAM214BQ7L5A3 538 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 SZRD1Q7Z422 152 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 GTPBP8Q8N3Z3 284 aaPredicted RBP13.91□□□□□ -0.18
SEC13-210ENST00000428626 OR10D3Q8NH80 312 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 CEP70Q8NHQ1 597 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 TWIST2Q8WVJ9 160 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 ZNF524Q96C55 264 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 SH3YL1Q96HL8 342 aaPredicted RBP13.91□□□□□ -0.18
SEC13-210ENST00000428626 MS4A4EQ96PG1 132 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 TMEM185BQ9H7F4 350 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 ACSS1Q9NUB1 689 aaPredicted RBP13.91□□□□□ -0.18
SEC13-210ENST00000428626 MED17Q9NVC6 651 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 ELOVL5Q9NYP7 299 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 SLC17A7Q9P2U7 560 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 PROCRQ9UNN8 238 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 USF3Q68DE3 2245 aa13.91□□□□□ -0.18
SEC13-210ENST00000428626 ABCA2Q9BZC7 2435 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 A0A0J9YW62 118 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 EFNA2O43921 213 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 CXCL13O43927 109 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 FGF4P08620 206 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 NEFHP12036 1026 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 ZNF17P17021 662 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 KCNJ5P48544 419 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 RPS3AP61247 264 aaKnown RBP13.9□□□□□ -0.18
SEC13-210ENST00000428626 SGCBQ16585 318 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 EXOC3L2Q2M3D2 409 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 ARL13AQ5H913 290 aaPredicted RBP13.9□□□□□ -0.18
SEC13-210ENST00000428626 ZCCHC23Q6ZST2 131 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 CNPY4Q8N129 248 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 CIARTQ8N365 385 aaPredicted RBP13.9□□□□□ -0.18
SEC13-210ENST00000428626 BANPQ8N9N5 519 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 OR7A2PQ8NGA2 310 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 ZFP28Q8NHY6 868 aa13.9□□□□□ -0.18
SEC13-210ENST00000428626 PPP1R14CQ8TAE6 165 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms