RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CDS1Q92903 461 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 PIGQQ9BRB3 760 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 PINK1Q9BXM7 581 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 CENPHQ9H3R5 247 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 LIME1Q9H400 295 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 CXorf36Q9H7Y0 433 aa16.6■□□□□ 0.25
PSPC1-202ENST00000427943 IGLV3-32A0A0A0MS00 114 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 ALG1L2C9J202 215 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 TNFSF13O75888 250 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 CPOXP36551 454 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 SIRPAP78324 504 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 POU6F2P78424 691 aaPredicted RBP16.59■□□□□ 0.25
PSPC1-202ENST00000427943 TP53BP2Q13625 1128 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 EXOSC6Q5RKV6 272 aaKnown RBP16.59■□□□□ 0.25
PSPC1-202ENST00000427943 CPTPQ5TA50 214 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 ZCCHC12Q6PEW1 402 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 ZNF781Q8N8C0 355 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 CNEP1R1Q8N9A8 125 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 SH3YL1Q96HL8 342 aaPredicted RBP16.59■□□□□ 0.25
PSPC1-202ENST00000427943 ZNF845Q96IR2 970 aaPredicted RBP16.59■□□□□ 0.25
PSPC1-202ENST00000427943 NPAS1Q99742 590 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 ATAD3AQ9NVI7 634 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 PACSIN3Q9UKS6 424 aa16.59■□□□□ 0.25
PSPC1-202ENST00000427943 FAM221AA4D161 298 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 SMNDC1O75940 238 aaKnown RBP eCLIP16.58■□□□□ 0.24
PSPC1-202ENST00000427943 SERPINE1P05121 402 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 NGFRP08138 427 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 G6PDP11413 515 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 RNF144AP50876 292 aaPredicted RBP16.58■□□□□ 0.24
PSPC1-202ENST00000427943 ART1P52961 327 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 IST1P53990 364 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 DIO3P55073 304 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 SPDYE7PQ495Y7 208 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 FBXW10Q5XX13 1052 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 VWA1Q6PCB0 445 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 OR5AK3PQ8NH89 298 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 GOT1L1Q8NHS2 421 aaPredicted RBP16.58■□□□□ 0.24
PSPC1-202ENST00000427943 FNDC9Q8TBE3 224 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 OR5P2Q8WZ92 322 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 KLHDC3Q9BQ90 382 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 BTBD2Q9BX70 525 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 PIGMQ9H3S5 423 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 GIN1Q9NXP7 522 aa16.58■□□□□ 0.24
PSPC1-202ENST00000427943 EIF3LQ9Y262 564 aaKnown RBP16.58■□□□□ 0.24
PSPC1-202ENST00000427943 NPIPA5A0A0B4J1W7 369 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 NPIPA7E9PJI5 369 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 LINC01387J3KSC0 135 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 SCDO00767 359 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 CFLARO15519 480 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 NPIPA8P0DM63 369 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 EPXP11678 715 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 HPGDP15428 266 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 TBXA2RP21731 343 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 SOAT1P35610 550 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 CCT3P49368 545 aaKnown RBP16.57■□□□□ 0.24
PSPC1-202ENST00000427943 EEFSECP57772 596 aaKnown RBP16.57■□□□□ 0.24
PSPC1-202ENST00000427943 ABCE1P61221 599 aaKnown RBP16.57■□□□□ 0.24
PSPC1-202ENST00000427943 PON3Q15166 354 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 CD226Q15762 336 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 TMEM44Q2T9K0 475 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 GLYR1Q49A26 553 aaPredicted RBP16.57■□□□□ 0.24
PSPC1-202ENST00000427943 CEP85LQ5SZL2 805 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 OR2A2Q6IF42 318 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 PPP4R4Q6NUP7 873 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 CDC73Q6P1J9 531 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 CDC20BQ86Y33 519 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 RIMKLAQ8IXN7 391 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 OR56A1Q8NGH5 318 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 COQ8BQ96D53 544 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 ZIM3Q96PE6 472 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 STACQ99469 402 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 C20orf27Q9GZN8 174 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 PIGUQ9H490 435 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 DUSP22Q9NRW4 184 aa16.57■□□□□ 0.24
PSPC1-202ENST00000427943 ABCA4P78363 2273 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 EIF1AYO14602 144 aaKnown RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 TNFRSF21O75509 655 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 PRPS1L1P21108 318 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 ZNF41P51814 821 aaPredicted RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 MAD2L1Q13257 205 aaPredicted RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 DAZAP2Q15038 168 aaPredicted RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 PGS1Q32NB8 556 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 PLPPR5Q32ZL2 321 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 LSM12Q3MHD2 195 aaKnown RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 SPNS3Q6ZMD2 512 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 GGNQ86UU5 652 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 METTL25Q8N6Q8 603 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 PSMA8Q8TAA3 256 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 ADAMTS15Q8TE58 950 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 PRPF18Q99633 342 aaKnown RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 DUSP26Q9BV47 211 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 ACTRT3Q9BYD9 372 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 BHLHE41Q9C0J9 482 aaPredicted RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 SSU72Q9NP77 194 aaKnown RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 UBQLN4Q9NRR5 601 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 CCM2LQ9NUG4 571 aaPredicted RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 GPATCH2Q9NW75 528 aa16.56■□□□□ 0.24
PSPC1-202ENST00000427943 NOP53Q9NZM5 478 aaKnown RBP16.56■□□□□ 0.24
PSPC1-202ENST00000427943 ST6GALNAC2Q9UJ37 374 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms