RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 CCNJQ5T5M9 372 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 PRAMEF20Q5VT98 475 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 FNDC7Q5VTL7 733 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 BICRALQ6AI39 1079 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 TNFAIP8L2Q6P589 184 aaPredicted RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 APOOLQ6UXV4 268 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 ZAR1Q86SH2 424 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 RNF130Q86XS8 419 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 FBXW8Q8N3Y1 598 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 TRIML2Q8N7C3 387 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 COX18Q8N8Q8 333 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 ANKS4BQ8N8V4 417 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 ZFP62Q8NB50 900 aaPredicted RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 CHDHQ8NE62 594 aaPredicted RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 OR4C3Q8NH37 302 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 DNAJB8Q8NHS0 232 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 RP9Q8TA86 221 aaKnown RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 GRHL3Q8TE85 626 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 XAGE5Q8WWM1 108 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 JADE3Q92613 823 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 RMND5BQ96G75 393 aaPredicted RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 AURKBQ96GD4 344 aaPredicted RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 FRMD6Q96NE9 622 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 FAM173AQ9BQD7 235 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 RTN4RQ9BZR6 473 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 ASF1BQ9NVP2 202 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 FLRT3Q9NZU0 649 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 VAPAQ9P0L0 249 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 MRTO4Q9UKD2 239 aaKnown RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 PCDHGB3Q9Y5G1 929 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 CAPN7Q9Y6W3 813 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 CHD6Q8TD26 2715 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 NBEAQ8NFP9 2946 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 SHANK1Q9Y566 2161 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 EIF4E1BA6NMX2 242 aaKnown RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 NPIPB9F8W1W9 429 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 HMGN4O00479 90 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 TMPRSS2O15393 492 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 ASNA1O43681 348 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 FCMRO60667 390 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 TRIM3O75382 744 aaPredicted RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 GLSO94925 669 aaPredicted RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 SNX4O95219 450 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 UTS2O95399 124 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 AGR2O95994 175 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 NGFRP08138 427 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 GUSBP08236 651 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 COX4I1P13073 169 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 ETFAP13804 333 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 GPX2P18283 190 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 MST1P26927 711 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 IL12BP29460 328 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 RFX3P48380 749 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 PSMD4P55036 377 aaKnown RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 RPP38P78345 283 aaKnown RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 TXNL4AP83876 142 aaKnown RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 ID3Q02535 119 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 FUT5Q11128 374 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 STX5Q13190 355 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 SNTA1Q13424 505 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 CYLC2Q14093 348 aaPredicted RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 RGNQ15493 299 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 INAQ16352 499 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 HYAL4Q2M3T9 481 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 GRAMD1BQ3KR37 738 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 DCST2Q5T1A1 773 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 XP32Q5T750 250 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 SLC30A6Q6NXT4 461 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 OLIG3Q7RTU3 272 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 GALNT10Q86SR1 603 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 SNX32Q86XE0 403 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 ZDHHC13Q8IUH4 622 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 C10orf111Q8N326 155 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 POU5F2Q8N7G0 328 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 POGLUT1Q8NBL1 392 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 OR52N2Q8NGI0 321 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 PNPT1Q8TCS8 783 aaKnown RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 FAR1Q8WVX9 515 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 TMCO6Q96DC7 493 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 ANKRD27Q96NW4 1050 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 CGREF1Q99674 301 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 CPPED1Q9BRF8 314 aaPredicted RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 G6PC3Q9BUM1 346 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 IKZF5Q9H5V7 419 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 IL1RL2Q9HB29 575 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 ZFP64Q9NPA5 681 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 TUBA8Q9NY65 449 aaPredicted RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 KCNE5Q9UJ90 142 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.77□□□□□ -1.33
LINC01049-201ENST00000426840 FREM3P0C091 2139 aa6.77□□□□□ -1.33
LINC01049-201ENST00000426840 PRAMEF25A6NGN4 478 aa6.76□□□□□ -1.33
LINC01049-201ENST00000426840 LRRC3CA6NJW4 275 aa6.76□□□□□ -1.33
LINC01049-201ENST00000426840 C17orf51A8MQB3 221 aa6.76□□□□□ -1.33
LINC01049-201ENST00000426840 BBIP1A8MTZ0 92 aa6.76□□□□□ -1.33
LINC01049-201ENST00000426840 B4DXG7 233 aa6.76□□□□□ -1.33
LINC01049-201ENST00000426840 ALG1L2C9J202 215 aa6.76□□□□□ -1.33
LINC01049-201ENST00000426840 FXYD1O00168 92 aa6.76□□□□□ -1.33
LINC01049-201ENST00000426840 MRASO14807 208 aa6.76□□□□□ -1.33
LINC01049-201ENST00000426840 ANGPT2O15123 496 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms