RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SLC27A4Q6P1M0 643 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 MTFR2Q6P444 385 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 KLBQ86Z14 1044 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 SECISBP2Q96T21 854 aaKnown RBP11.09□□□□□ -0.63
PTPRN-204ENST00000423636 NEURL2Q9BR09 285 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 SYNDIG1Q9H7V2 258 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 PILRAQ9UKJ1 303 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 ZFHX4Q86UP3 3567 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 AHCTF1Q8WYP5 2266 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 ANKRD33BA6NCL7 494 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 EFCAB10A6NFE3 127 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 LOC110117498-PIK3R3F6TDL0 507 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 STX4Q12846 297 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 PEX5LQ8IYB4 626 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 RFLNBQ8N5W9 214 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 RAB11FIP5Q9BXF6 653 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 LMAN1LQ9HAT1 526 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 TAS2R7Q9NYW3 318 aa11.09□□□□□ -0.63
PTPRN-204ENST00000423636 PCNX3Q9H6A9 2034 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 A0A1W2PRQ8 180 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 ABATP80404 500 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 BNC1Q01954 994 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 BHLHB9Q6PI77 547 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 C16orf47Q6ZP98 133 aaPredicted RBP11.08□□□□□ -0.64
PTPRN-204ENST00000423636 OR13C5Q8NGS8 318 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 DIO2Q92813 273 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 HINT3Q9NQE9 182 aaKnown RBP11.08□□□□□ -0.64
PTPRN-204ENST00000423636 KLHL28Q9NXS3 571 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 LRIT1Q9P2V4 623 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 GRIP1Q9Y3R0 1128 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 DSPPQ9NZW4 1301 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 A0A0G2JPF8 293 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 HNRNPCL2B2RXH8 293 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 HNRNPCL3B7ZW38 293 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 GUCY1B2O75343 617 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 IGKV1D-16P01601 117 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 HNRNPCL4P0DMR1 293 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 PI4KAP42356 2102 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 RPS27P42677 84 aaKnown RBP11.08□□□□□ -0.64
PTPRN-204ENST00000423636 MTNR1AP48039 350 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 TPTEP56180 551 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 RAB25P57735 213 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 TSSK4Q6SA08 328 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 CHRDL2Q6WN34 429 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 USP43Q70EL4 1123 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 PHC2Q8IXK0 858 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 ZNF655Q8N720 491 aaPredicted RBP11.08□□□□□ -0.64
PTPRN-204ENST00000423636 SMRP1Q8NCR6 262 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 OR10H4Q8NGA5 316 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 OR5M3Q8NGP4 307 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 THAP3Q8WTV1 239 aaPredicted RBP11.08□□□□□ -0.64
PTPRN-204ENST00000423636 CNDP2Q96KP4 475 aaKnown RBP11.08□□□□□ -0.64
PTPRN-204ENST00000423636 IFT27Q9BW83 186 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 SPRTNQ9H040 489 aaPredicted RBP11.08□□□□□ -0.64
PTPRN-204ENST00000423636 SLC25A19Q9HC21 320 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 ADAM29Q9UKF5 820 aa11.08□□□□□ -0.64
PTPRN-204ENST00000423636 A0A087WV48 116 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 A6NCN8 305 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 AGAP5A6NIR3 686 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 PRR19A6NJB7 356 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 KHNYNO15037 678 aaKnown RBP11.07□□□□□ -0.64
PTPRN-204ENST00000423636 WNT1P04628 370 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 MYL12AP19105 171 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 TNFSF8P32971 234 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 ACVR1BP36896 505 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 OR1Q1Q15612 314 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 SIRT6Q8N6T7 355 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 SRFBP1Q8NEF9 429 aaKnown RBP11.07□□□□□ -0.64
PTPRN-204ENST00000423636 PIGXQ8TBF5 258 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 NELL2Q99435 816 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 NKX3-1Q99801 234 aaPredicted RBP11.07□□□□□ -0.64
PTPRN-204ENST00000423636 LRRC61Q9BV99 259 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 PNO1Q9NRX1 252 aaKnown RBP11.07□□□□□ -0.64
PTPRN-204ENST00000423636 ERVK-19Q9WJR5 959 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 SLC22A7Q9Y694 548 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 C2orf72A6NCS6 295 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 PSMA1P25786 263 aaKnown RBP11.07□□□□□ -0.64
PTPRN-204ENST00000423636 OMPP47874 163 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 SMSP52788 366 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 ST3GAL3Q11203 375 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 DUSP8Q13202 625 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 TRAM2Q15035 370 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 OR5M10Q6IEU7 315 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 LYSMD2Q8IV50 215 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 OR4C3Q8NH37 302 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 CHPT1Q8WUD6 406 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 RBM18Q96H35 190 aaKnown RBP11.07□□□□□ -0.64
PTPRN-204ENST00000423636 MS4A4EQ96PG1 132 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 FKBP14Q9NWM8 211 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 ZNF232Q9UNY5 417 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 ADAM18Q9Y3Q7 739 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 RPL36Q9Y3U8 105 aaKnown RBP11.07□□□□□ -0.64
PTPRN-204ENST00000423636 PCDHGA3Q9Y5H0 932 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 SHISA3A0PJX4 238 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 KLHL33A6NCF5 533 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 C2orf74A8MZ97 194 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 KDM1AO60341 852 aa11.07□□□□□ -0.64
PTPRN-204ENST00000423636 NAA10P41227 235 aaPredicted RBP11.07□□□□□ -0.64
PTPRN-204ENST00000423636 CCINQ13939 588 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms