RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 HSD3B2P26439 372 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 NUDT6P53370 316 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 RAE1P78406 368 aaKnown RBP14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 IRX1P78414 480 aaPredicted RBP14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 ITGADQ13349 1161 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 TMEM201Q5SNT2 666 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 PDSS1Q5T2R2 415 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 AGAP6Q5VW22 663 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 HBMQ6B0K9 141 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 CLEC2AQ6UVW9 174 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 NUFIP2Q7Z417 695 aaKnown RBP14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 PLD6Q8N2A8 252 aaKnown RBP14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 RNF128Q8TEB7 428 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 KISS1RQ969F8 398 aaPredicted RBP14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 ZBTB8AQ96BR9 441 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 ADAD1Q96M93 576 aaKnown RBP14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 ERP44Q9BS26 406 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 POTEKPQ9BYX7 375 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 GP6Q9HCN6 339 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 ZNF225Q9UK10 706 aa14.86□□□□□ -0.03
CHCHD3-202ENST00000423635 UPK1AO00322 258 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 LMX1BO60663 402 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 NTN1O95631 604 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 ADAP00813 363 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 TYK2P29597 1187 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 CARD18P57730 90 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 C21orf58P58505 322 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 RNPS1Q15287 305 aaKnown RBP14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 TUSC5Q8IXB3 177 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 ZNF619Q8N2I2 560 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 ACTRT2Q8TDY3 377 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 C16orf78Q8WTQ4 265 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 LMF2Q9BU23 707 aaKnown RBP14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 GRHL1Q9NZI5 618 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 FREM1Q5H8C1 2179 aa14.85□□□□□ -0.03
CHCHD3-202ENST00000423635 GOLGA8QA0A0J9YX86 632 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 GOLGA8OA6NCC3 632 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 ZNF814B7Z6K7 855 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 ALG1L2C9J202 215 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 GOLGA8NF8WBI6 632 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 GOLGA8RI6L899 631 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 WIPF1O43516 503 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 GMFGO60234 142 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 PCDH7O60245 1069 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 RPS17P08708 135 aaKnown RBP14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 IGHV4-31P0DP07 118 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 SRD5A1P18405 259 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 MAGEA4P43358 317 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 SRSF2Q01130 221 aaKnown RBP14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 GRAMD1BQ3KR37 738 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 C11orf71Q6IPW1 123 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 SSX8Q7RTT4 187 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 TRABD2AQ86V40 505 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 TDRPQ86YL5 185 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 OR2L13Q8N349 312 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 ARIH2OSQ8N7S6 290 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 BANPQ8N9N5 519 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 ZNF483Q8TF39 744 aaPredicted RBP14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 ABHD3Q8WU67 409 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 PROX1Q92786 737 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 RADILQ96JH8 1075 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 BBS4Q96RK4 519 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 C1QTNF3Q9BXJ4 246 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 DPH5Q9H2P9 285 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 KLHL13Q9P2N7 655 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 DMGDHQ9UI17 866 aaKnown RBP14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 NFU1Q9UMS0 254 aa14.84□□□□□ -0.03
CHCHD3-202ENST00000423635 A0A1W2PRB8 838 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 FAM187AA6NFU0 413 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 TTC36A6NLP5 189 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 SMIM24O75264 130 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 IGKV1D-16P01601 117 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 CHN1P15882 459 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 PTNP21246 168 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 TTKP33981 857 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 GSTM5P46439 218 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 CDH13P55290 713 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 MRPS25P82663 173 aaKnown RBP14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 GUCY2DQ02846 1103 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 ZNHIT3Q15649 155 aaPredicted RBP14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 ZNF239Q16600 458 aaKnown RBP14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 PRSS53Q2L4Q9 553 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 PLPPR5Q32ZL2 321 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 GALNT18Q6P9A2 607 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 RPS27LQ71UM5 84 aaKnown RBP14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 BHLHA15Q7RTS1 189 aaPredicted RBP14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 CCDC25Q86WR0 208 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 POC1BQ8TC44 478 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 REXO5Q96IC2 774 aaKnown RBP14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 KLHL15Q96M94 604 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 RNF145Q96MT1 663 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 CACNG6Q9BXT2 260 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 VPS11Q9H270 941 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 C3orf14Q9HBI5 128 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 CBLN4Q9NTU7 201 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 MED17Q9NVC6 651 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 TAS2R7Q9NYW3 318 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 GRID1Q9ULK0 1009 aa14.83□□□□□ -0.04
CHCHD3-202ENST00000423635 GNG14A0A1W2PPG7 69 aa14.82□□□□□ -0.04
CHCHD3-202ENST00000423635 MANBAO00462 879 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms