RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PEX19P40855 299 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 ASMTP46597 345 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 CLDN15P56746 228 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 EMX2Q04743 252 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 MAD2L1Q13257 205 aaPredicted RBP13.72□□□□□ -0.21
USB1-202ENST00000423271 PTGR1Q14914 329 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 SMU1Q2TAY7 513 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 ZAR1Q86SH2 424 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 LUZP2Q86TE4 346 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 GRAMD2AQ8IUY3 354 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 LINC01560Q8TB33 94 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 FAM222BQ8WU58 562 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 NUDT8Q8WV74 236 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 SLC9A6Q92581 669 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 C1GALT1C1Q96EU7 318 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 C16orf58Q96GQ5 468 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 MS4A4EQ96PG1 132 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 SFXN3Q9BWM7 321 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 POLDIP3Q9BY77 421 aaKnown RBP13.72□□□□□ -0.21
USB1-202ENST00000423271 TBL1XR1Q9BZK7 514 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 C3orf14Q9HBI5 128 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 SDHAF3Q9NRP4 125 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 RASSF1Q9NS23 344 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 SIRT3Q9NTG7 399 aaPredicted RBP13.72□□□□□ -0.21
USB1-202ENST00000423271 ACSS1Q9NUB1 689 aaPredicted RBP13.72□□□□□ -0.21
USB1-202ENST00000423271 ASIC5Q9NY37 505 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 NTMQ9P121 344 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 FOXD3Q9UJU5 478 aaPredicted RBP13.72□□□□□ -0.21
USB1-202ENST00000423271 MRTO4Q9UKD2 239 aaKnown RBP13.72□□□□□ -0.21
USB1-202ENST00000423271 EIF3LQ9Y262 564 aaKnown RBP13.72□□□□□ -0.21
USB1-202ENST00000423271 USH1CQ9Y6N9 552 aa13.72□□□□□ -0.21
USB1-202ENST00000423271 MTORP42345 2549 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 FAM221AA4D161 298 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 TTC36A6NLP5 189 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 A6NNC1 897 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 SHISA8B8ZZ34 492 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 ZNF195O14628 629 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 SEC14L5O43304 696 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 ANGPTL1O95841 491 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 G6PDP11413 515 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 PEPDP12955 493 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 SUCLG1P53597 346 aaKnown RBP13.71□□□□□ -0.21
USB1-202ENST00000423271 PSMD4P55036 377 aaKnown RBP13.71□□□□□ -0.21
USB1-202ENST00000423271 DIO3P55073 304 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 GANABQ14697 944 aaKnown RBP13.71□□□□□ -0.21
USB1-202ENST00000423271 DUSP5Q16690 384 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 SLC9B1Q4ZJI4 515 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 MFSD12Q6NUT3 480 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 FIGNL1Q6PIW4 674 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 ARFGAP2Q8N6H7 521 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 CDRT4Q8N9R6 151 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 SLC16A11Q8NCK7 471 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 OR7A2PQ8NGA2 310 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 CEP70Q8NHQ1 597 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 MTERF3Q96E29 417 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 ZFP3Q96NJ6 502 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 YIPF4Q9BSR8 244 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 RBM24Q9BX46 236 aaKnown RBP13.71□□□□□ -0.21
USB1-202ENST00000423271 CLEC4MQ9H2X3 399 aaPredicted RBP13.71□□□□□ -0.21
USB1-202ENST00000423271 LIME1Q9H400 295 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 FBXO34Q9NWN3 711 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 GALNT8Q9NY28 637 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 NOP53Q9NZM5 478 aaKnown RBP13.71□□□□□ -0.21
USB1-202ENST00000423271 ATP6V1HQ9UI12 483 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 ZNF337Q9Y3M9 751 aa13.71□□□□□ -0.21
USB1-202ENST00000423271 NUP214P35658 2090 aaPredicted RBP13.71□□□□□ -0.21
USB1-202ENST00000423271 IGLV3-32A0A0A0MS00 114 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 A0A1W2PNV4 684 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 OR2M5A3KFT3 312 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 TUBAL3A6NHL2 446 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 H3BML4 177 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 EMC8O43402 210 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 TNFSF13O75888 250 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 KCNK2O95069 426 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 ALDOCP09972 364 aaKnown RBP13.7□□□□□ -0.22
USB1-202ENST00000423271 LAMP1P11279 417 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 HPCAL1P37235 193 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 CLK3P49761 638 aaKnown RBP13.7□□□□□ -0.22
USB1-202ENST00000423271 ART1P52961 327 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 PRR5P85299 388 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 SORDQ00796 357 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 BCL2A1Q16548 175 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 VPS26BQ4G0F5 336 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 EXOSC6Q5RKV6 272 aaKnown RBP13.7□□□□□ -0.22
USB1-202ENST00000423271 OGFOD2Q6N063 350 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 SPNS3Q6ZMD2 512 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 P4HA3Q7Z4N8 544 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 R3HCC1LQ7Z5L2 792 aaKnown RBP13.7□□□□□ -0.22
USB1-202ENST00000423271 KIF18BQ86Y91 864 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 LRRC34Q8IZ02 419 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 KRTCAP2Q8N6L1 136 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 GATSQ8NAP1 163 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 OR4C3Q8NH37 302 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 FIG4Q92562 907 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 FAM120BQ96EK7 910 aaKnown RBP13.7□□□□□ -0.22
USB1-202ENST00000423271 MAELQ96JY0 434 aaKnown RBP13.7□□□□□ -0.22
USB1-202ENST00000423271 PTGES2Q9H7Z7 377 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 ITPR3Q14573 2671 aa13.7□□□□□ -0.22
USB1-202ENST00000423271 PRRC2AP48634 2157 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms