RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 P2RX2Q9UBL9 471 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 TNFRSF10DQ9UBN6 386 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 SLC6A5Q9Y345 797 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 CAPN7Q9Y6W3 813 aa14.35□□□□□ -0.11
BRAT1-202ENST00000421712 LOC100653049A0A140TA62 436 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 A0A1B0GUH1 482 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 EVPLLA8MZ36 301 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 AQP7O14520 342 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 LRRTM2O43300 516 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 KRT34O76011 436 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 H6PDO95479 791 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 HPNP05981 417 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 STSP08842 583 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 ESRRAP11474 423 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-202ENST00000421712 PPIBP23284 216 aaKnown RBP14.34□□□□□ -0.11
BRAT1-202ENST00000421712 DPP4P27487 766 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 MAGEA8P43361 318 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 DSCR4P56555 118 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-202ENST00000421712 DSTNP60981 165 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 NFYCQ13952 458 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 SYPL1Q16563 259 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 C3AR1Q16581 482 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 LRIF1Q5T3J3 769 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 WLSQ5T9L3 541 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 FGD2Q7Z6J4 655 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 DHDDSQ86SQ9 333 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 FJX1Q86VR8 437 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 MISPQ8IVT2 679 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 ANKFN1Q8N957 763 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 OR5M9Q8NGP3 310 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 PLSCR2Q9NRY7 297 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 SLC25A37Q9NYZ2 338 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 VAPAQ9P0L0 249 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 ARMCX1Q9P291 453 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 TINAGQ9UJW2 476 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 SLC5A6Q9Y289 635 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 RPH3AQ9Y2J0 694 aaPredicted RBP14.34□□□□□ -0.11
BRAT1-202ENST00000421712 ZNF835Q9Y2P0 537 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 DTNAQ9Y4J8 743 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 HRH3Q9Y5N1 445 aa14.34□□□□□ -0.11
BRAT1-202ENST00000421712 A0A1B0GVC2 190 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 A0A1W2PQD3 144 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 OR14I1A6ND48 311 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 FAM47E-STBD1D6RA91 191 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 CCL21O00585 134 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 BCKDKO14874 412 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 HCRTR2O43614 444 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 CYP7B1O75881 506 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 NUDT14O95848 222 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 HK1P19367 917 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 ADSLP30566 484 aaPredicted RBP14.33□□□□□ -0.12
BRAT1-202ENST00000421712 SRD5A2P31213 254 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 CA7P43166 264 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 CHRNEQ04844 493 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 CYLC2Q14093 348 aaPredicted RBP14.33□□□□□ -0.12
BRAT1-202ENST00000421712 RGNQ15493 299 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 C4orf17Q53FE4 359 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 KLHL26Q53HC5 615 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 PDZK1Q5T2W1 519 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 TYW3Q6IPR3 259 aaKnown RBP14.33□□□□□ -0.12
BRAT1-202ENST00000421712 ZNF585AQ6P3V2 769 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 MTERF4Q7Z6M4 381 aaKnown RBP14.33□□□□□ -0.12
BRAT1-202ENST00000421712 MTDHQ86UE4 582 aaKnown RBP14.33□□□□□ -0.12
BRAT1-202ENST00000421712 CD163Q86VB7 1156 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 IFNEQ86WN2 208 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 SNX32Q86XE0 403 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 ZNF619Q8N2I2 560 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 FADS6Q8N9I5 356 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 B4GALNT2Q8NHY0 566 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 FAM57AQ8TBR7 257 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 TRNT1Q96Q11 434 aaKnown RBP14.33□□□□□ -0.12
BRAT1-202ENST00000421712 THUMPD3Q9BV44 507 aaKnown RBP14.33□□□□□ -0.12
BRAT1-202ENST00000421712 ZNF350Q9GZX5 532 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 POLE3Q9NRF9 147 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 THUMPD1Q9NXG2 353 aaKnown RBP14.33□□□□□ -0.12
BRAT1-202ENST00000421712 SPRR3Q9UBC9 169 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 CORO2BQ9UQ03 480 aa14.33□□□□□ -0.12
BRAT1-202ENST00000421712 MYO7BQ6PIF6 2116 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 SNX3O60493 162 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 SEMA7AO75326 666 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 BCHEP06276 602 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 CHRM4P08173 479 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 ENDOUP21128 410 aaKnown RBP14.32□□□□□ -0.12
BRAT1-202ENST00000421712 MSX1P28360 303 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 MVDP53602 400 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 FUT5Q11128 374 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 FADDQ13158 208 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 GNA13Q14344 377 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 GANABQ14697 944 aaKnown RBP14.32□□□□□ -0.12
BRAT1-202ENST00000421712 CD226Q15762 336 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 ZNF630Q2M218 657 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-202ENST00000421712 GXYLT1Q4G148 440 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 RAET1LQ5VY80 246 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 AAGABQ6PD74 315 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 DLEU7Q6UYE1 221 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 C3P1Q6ZMU1 363 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 Q6ZPB1 254 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-202ENST00000421712 LRRC74BQ6ZQY2 392 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 HMGN2P46Q86SG4 172 aa14.32□□□□□ -0.12
BRAT1-202ENST00000421712 RETREG3Q86VR2 466 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms