RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 MED17Q9NVC6 651 aa7.23□□□□□ -1.25
VIM-202ENST00000421459 GDF2Q9UK05 429 aaPredicted RBP7.23□□□□□ -1.25
VIM-202ENST00000421459 ABCG2Q9UNQ0 655 aa7.23□□□□□ -1.25
VIM-202ENST00000421459 EMC9Q9Y3B6 208 aa7.23□□□□□ -1.25
VIM-202ENST00000421459 MAGED1Q9Y5V3 778 aaPredicted RBP7.23□□□□□ -1.25
VIM-202ENST00000421459 PTGDR2Q9Y5Y4 395 aa7.23□□□□□ -1.25
VIM-202ENST00000421459 ANK2Q01484 3957 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 IGLV3-32A0A0A0MS00 114 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 IGHV3-15A0A0B4J1V0 119 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 RNF212BA8MTL3 300 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 C9JVG2 144 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 LINC01387J3KSC0 135 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 OIP5O43482 229 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 AKAP10O43572 662 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 NDUFB5O43674 189 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 GPRIN2O60269 458 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 RAMP1O60894 148 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ADAM11O75078 769 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 GCM2O75603 506 aaPredicted RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 SYNGR4O95473 234 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 OXSR1O95747 527 aaPredicted RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 SNRPAP09012 282 aaKnown RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 DANCRP0C864 163 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ACP2P11117 423 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 TAC1P20366 129 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ATP5F1P24539 256 aaPredicted RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 EDNRAP25101 427 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 PSMA4P25789 261 aaKnown RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 AGTR1P30556 359 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 SFTPDP35247 375 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 PRIM2P49643 509 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 PRKAA2P54646 552 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ETF1P62495 437 aaKnown RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 PRR5P85299 388 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 SLC18A2Q05940 514 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ZNF763Q0D2J5 394 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 LCP2Q13094 533 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 FGFBP1Q14512 234 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ZNHIT3Q15649 155 aaPredicted RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 CD226Q15762 336 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 GLYR1Q49A26 553 aaPredicted RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 CCNJQ5T5M9 372 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 CPTPQ5TA50 214 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 HBMQ6B0K9 141 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 NOXRED1Q6NXP6 359 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 RELL1Q8IUW5 271 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 TUSC5Q8IXB3 177 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 PHC2Q8IXK0 858 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 GTPBP8Q8N3Z3 284 aaPredicted RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 CCNYL1Q8N7R7 359 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 NOA1Q8NC60 698 aaKnown RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 KBTBD8Q8NFY9 601 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 OR2V1Q8NHB1 315 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ABHD3Q8WU67 409 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 NANOS1Q8WY41 292 aaKnown RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 CAVIN3Q969G5 261 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ZNF775Q96BV0 537 aaPredicted RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 DTNBP1Q96EV8 351 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 SRXN1Q9BYN0 137 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 REG4Q9BYZ8 158 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 MIEF1Q9NQG6 463 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 YAE1D1Q9NRH1 226 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 ZNF180Q9UJW8 692 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 EMCNQ9ULC0 261 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 LIPT1Q9Y234 373 aa7.22□□□□□ -1.25
VIM-202ENST00000421459 RAI1Q7Z5J4 1906 aaPredicted RBP7.22□□□□□ -1.25
VIM-202ENST00000421459 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 NPIPA5A0A0B4J1W7 369 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 DPRXA6NFQ7 191 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 ALG1L2C9J202 215 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 NPIPA7E9PJI5 369 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 OVOL3O00110 214 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 ADAMDEC1O15204 470 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 KCNK2O95069 426 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 NKX2-2O95096 273 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 KCNH1O95259 989 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 ADAP00813 363 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 CD8AP01732 235 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 IGHV4-39P01824 125 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 NPIPA8P0DM63 369 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 PYGBP11216 843 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 PRPS2P11908 318 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 FCGR2AP12318 317 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 PPP3CBP16298 524 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 NTSP30990 170 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 MAP3K8P41279 467 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 PKNOX1P55347 436 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 CARD18P57730 90 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 RPS4XP62701 263 aaKnown RBP7.21□□□□□ -1.26
VIM-202ENST00000421459 RAC1P63000 192 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 PSPHP78330 225 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 DMTNQ08495 405 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 TAB1Q15750 504 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 TOMM34Q15785 309 aaPredicted RBP7.21□□□□□ -1.26
VIM-202ENST00000421459 DUSP5Q16690 384 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 IMPG1Q17R60 797 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 PGGHGQ32M88 737 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 PLPPR5Q32ZL2 321 aa7.21□□□□□ -1.26
VIM-202ENST00000421459 NDUFAF6Q330K2 333 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms