RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 AK5Q9Y6K8 562 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZFYVE26Q68DK2 2539 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 ITPR1Q14643 2758 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 PRKNO60260 465 aaPredicted RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 PPM1BO75688 479 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 CST1P01037 141 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 FBXO45P0C2W1 286 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 VHLP40337 213 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 BTBD16Q32M84 506 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 TBC1D25Q3MII6 688 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 FNDC7Q5VTL7 733 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR2T5Q6IEZ7 315 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 LYPD8Q6UX82 237 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 NUP54Q7Z3B4 507 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZAR1Q86SH2 424 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 CARM1Q86X55 608 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 VRK2Q86Y07 508 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 MISPQ8IVT2 679 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 IL22RA1Q8N6P7 574 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 TOR1AIP2Q8NFQ8 470 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR2T29Q8NH02 315 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 SNIP1Q8TAD8 396 aaKnown RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 SLC22A8Q8TCC7 542 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 THAP4Q8WY91 577 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 TMBIM1Q969X1 311 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 RNF31Q96EP0 1072 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 EPYCQ99645 322 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 PIP5K1AQ99755 562 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 PSD2Q9BQI7 771 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 DEFB126Q9BYW3 111 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 ANKRD19PQ9H560 264 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 P4HTMQ9NXG6 502 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 YARS2Q9Y2Z4 477 aaKnown RBP13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 SH3GLB1Q9Y371 365 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 DTNAQ9Y4J8 743 aa13.13□□□□□ -0.31
SHMT1P1-201ENST00000419974 ARRDC5A6NEK1 342 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 ALG1L2C9J202 215 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 FAAHO00519 579 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 PEX12O00623 359 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 THRBP10828 461 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 KRT20P35900 424 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 EIF2S3P41091 472 aaKnown RBP13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 LIMS1P48059 325 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 SMIM11AP58511 58 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 RPS18P62269 152 aaKnown RBP13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 PLCXD2Q0VAA5 305 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 IL10RAQ13651 578 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 PPP4R4Q6NUP7 873 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF440Q8IYI8 595 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR4C3Q8NH37 302 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 NRG4Q8WWG1 115 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 FGF11Q92914 225 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 NTNG2Q96CW9 530 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 OMA1Q96E52 524 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 FER1L6-AS2Q96M78 137 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 GAL3ST4Q96RP7 486 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 QRSL1Q9H0R6 528 aaKnown RBP13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 GPN2Q9H9Y4 310 aaPredicted RBP13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 FBXL4Q9UKA2 621 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 SLC13A4Q9UKG4 626 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 SSUH2Q9Y2M2 353 aa13.12□□□□□ -0.31
SHMT1P1-201ENST00000419974 NBEAQ8NFP9 2946 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 SCN2AQ99250 2005 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 A0A1W2PRQ8 180 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 SERINC4A6NH21 518 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 HS6ST1O60243 411 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 FADS1O60427 444 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 SEMA7AO75326 666 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 UTS2O95399 124 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 IL12BP29460 328 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 DNAJA1P31689 397 aaKnown RBP13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 PLAURQ03405 335 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 SNTA1Q13424 505 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 DGCR6Q14129 220 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 TRIP10Q15642 601 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 NTRK2Q16620 822 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF791Q3KP31 576 aaPredicted RBP13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 MRPL2Q5T653 305 aaKnown RBP13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 FAM69BQ5VUD6 431 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 SHQ1Q6PI26 577 aaKnown RBP13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF836Q6ZNA1 936 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 COMTD1Q86VU5 262 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 CYP4Z1Q86W10 505 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 HIPK1Q86Z02 1210 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 GPALPP1Q8IXQ4 340 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 CLIP4Q8N3C7 705 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 SLC5A8Q8N695 610 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 LSMEM1Q8N8F7 131 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 PIK3C3Q8NEB9 887 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR6T1Q8NGN1 323 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR10Q1Q8NGQ4 319 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 OR5K1Q8NHB7 308 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 HGDQ93099 445 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 C9orf16Q9BUW7 83 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 GABARAPL1Q9H0R8 117 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 ZNF160Q9HCG1 818 aa13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 TESQ9UGI8 421 aaKnown RBP13.11□□□□□ -0.31
SHMT1P1-201ENST00000419974 IL17BQ9UHF5 180 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms