RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 NR2C2APQ86WQ0 139 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF761Q86XN6 746 aaPredicted RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 DNAJC5GQ8N7S2 189 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 TSACCQ96A04 125 aaPredicted RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ASB16Q96NS5 453 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 WDFY2Q96P53 400 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 PPIL3Q9H2H8 161 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 CACYBPQ9HB71 228 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 STARD5Q9NSY2 213 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 EXOSC1Q9Y3B2 195 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 J3QLW9 94 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 LYRM1O43325 122 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 LANCL1O43813 399 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF19P17023 458 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ELK1P19419 428 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ANXA11P50995 505 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 BNC1Q01954 994 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ASAH1Q13510 395 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 TPBGQ13641 420 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 EXOSC7Q15024 291 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 NNATQ16517 81 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 PUS10Q3MIT2 529 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 THOC7Q6I9Y2 204 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 SFTPA2Q8IWL1 248 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 TIGD4Q8IY51 512 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ATF6BQ99941 703 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 MKRN2Q9H000 416 aaKnown RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 RNF32Q9H0A6 362 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 C11orf49Q9H6J7 331 aa11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF624Q9P2J8 865 aaPredicted RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.1□□□□□ -0.63
LIMK1-202ENST00000418310 TRANK1O15050 2925 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 TMEM129A0AVI4 362 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 POM121BA6NF01 834 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 H3BSH0 61 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 AKAP8O43823 692 aaKnown RBP11.09□□□□□ -0.63
LIMK1-202ENST00000418310 NOS3P29474 1203 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 DDOSTP39656 456 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 DSG2Q14126 1118 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF836Q6ZNA1 936 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 ESPNLQ6ZVH7 1005 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 SAMD12Q8N8I0 201 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 GDPD1Q8N9F7 314 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 OR2T33Q8NG76 320 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 OR5T3Q8NGG3 340 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 OR13C2Q8NGS9 318 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 IFT27Q9BW83 186 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 OR52D1Q9H346 318 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 IL23AQ9NPF7 189 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 TBC1D29Q9UFV1 150 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 A0A1W2PRG6 482 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 FAM172BPA6NC97 362 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 HLA-DPB1P04440 258 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 CEACAM5P06731 702 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 PKLRP30613 574 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 GXYLT1Q4G148 440 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF628Q5EBL2 1059 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 FAM109BQ6ICB4 259 aaPredicted RBP11.09□□□□□ -0.63
LIMK1-202ENST00000418310 WDR88Q6ZMY6 472 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 RASSF6Q6ZTQ3 369 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 PATE1Q8WXA2 126 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 ACOT11Q8WXI4 607 aaPredicted RBP11.09□□□□□ -0.63
LIMK1-202ENST00000418310 SMARCD2Q92925 531 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 ORAI1Q96D31 301 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 DNAJA3Q96EY1 480 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 UBQLN3Q9H347 655 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 ACSL5Q9ULC5 683 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 CBLCQ9ULV8 474 aa11.09□□□□□ -0.63
LIMK1-202ENST00000418310 ZNF443Q9Y2A4 671 aaPredicted RBP11.09□□□□□ -0.63
LIMK1-202ENST00000418310 DAPL1A0PJW8 107 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 LINC01553A4QN01 128 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 PROM1O43490 865 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 SYPP08247 313 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 PRKAR1AP10644 381 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 PEPDP12955 493 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 POLR2CP19387 275 aaPredicted RBP11.08□□□□□ -0.64
LIMK1-202ENST00000418310 NDUFV2P19404 249 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 MAKP20794 623 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 NT5EP21589 574 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 HSD17B2P37059 387 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 SRP54P61011 504 aaKnown RBP11.08□□□□□ -0.64
LIMK1-202ENST00000418310 HTRA4P83105 476 aaPredicted RBP11.08□□□□□ -0.64
LIMK1-202ENST00000418310 E2F1Q01094 437 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 RPE65Q16518 533 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 ENPP7Q6UWV6 458 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 FRRS1Q6ZNA5 592 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 ZNF620Q6ZNG0 422 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 ARL14Q8N4G2 192 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 NATD1Q8N6N6 113 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 FANK1Q8TC84 345 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 RFKQ969G6 155 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 RIPOR3Q96MK2 946 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 RPP25Q9BUL9 199 aaKnown RBP11.08□□□□□ -0.64
LIMK1-202ENST00000418310 ALG8Q9BVK2 526 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 TEX12Q9BXU0 123 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 BCL2L10Q9HD36 194 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 LAMA1P25391 3075 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 PSMD9O00233 223 aa11.08□□□□□ -0.64
LIMK1-202ENST00000418310 CASC3O15234 703 aaKnown RBP11.08□□□□□ -0.64
LIMK1-202ENST00000418310 EEF1E1O43324 174 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms