RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 ABHD13Q7L211 337 aa10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 BBS1Q8NFJ9 593 aa10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 RIPOR3Q96MK2 946 aa10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ZNF681Q96N22 645 aa10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 TMEM246Q9BRR3 403 aa10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 UBQLN3Q9H347 655 aa10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 C6orf106Q9H6K1 298 aaPredicted RBP10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 HINT3Q9NQE9 182 aaKnown RBP10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 NDRG2Q9UN36 371 aaKnown RBP10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 POLHQ9Y253 713 aa10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 NCKAP1Q9Y2A7 1128 aa10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 CLCA3PQ9Y6N3 262 aa10.92□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 LRRK1Q38SD2 2015 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 B4DXG7 233 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 CA3P07451 260 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 CD79BP40259 229 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 CLDN2P57739 230 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 MRPL28Q13084 256 aaKnown RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 METAP1DQ6UB28 335 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 FRRS1Q6ZNA5 592 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 CAMKVQ8NCB2 501 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 SERINC2Q96SA4 455 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 TRPV5Q9NQA5 729 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 TBC1D29Q9UFV1 150 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ALPK3Q96L96 1907 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 RIIAD1A6NNX1 92 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PRR23D1E9PI22 279 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ORC5O43913 435 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 RASGRP1O95267 797 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 DBIP07108 87 aaKnown RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 GKN3PP0CG01 181 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PRR23D2P0DMB1 279 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 F8A1P23610 371 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 BMP8BP34820 402 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 DUSP5Q16690 384 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ZNF425Q6IV72 752 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ARL9Q6T311 187 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ZNF322Q6U7Q0 402 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 DGLUCYQ7Z3D6 616 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 BMP8AQ7Z5Y6 402 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 OR4C6Q8NH72 309 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 SLC7A6Q92536 515 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ALG8Q9BVK2 526 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 TMEM27Q9HBJ8 222 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 RANGRFQ9HD47 186 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ASB6Q9NWX5 421 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 NLKQ9UBE8 527 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 TEKT2Q9UIF3 430 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 SF3B6Q9Y3B4 125 aaKnown RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 SLC19A2O60779 497 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 RNF144AP50876 292 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ZNF628Q5EBL2 1059 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PPP2R2DQ66LE6 453 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ZNF836Q6ZNA1 936 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 MRGPREQ86SM8 312 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ZNF655Q8N720 491 aaPredicted RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 TMEM239Q8WW34 195 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 HS6ST2Q96MM7 605 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 NDC1Q9BTX1 674 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 MKRN2Q9H000 416 aaKnown RBP10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 BABAM2Q9NXR7 383 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ING3Q9NXR8 418 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 MED31Q9Y3C7 131 aa10.91□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 OR6C70A6NIJ9 312 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 C5orf67F2Z3F1 127 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 LYRM1O43325 122 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 RGS9O75916 674 aaPredicted RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 LALBAP00709 142 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PRG2P13727 222 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 POLR2CP19387 275 aaPredicted RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PEBP1P30086 187 aaKnown RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 FLYWCH1Q4VC44 716 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PRRT3Q5FWE3 981 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ACOT12Q8WYK0 555 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 ST6GAL2Q96JF0 529 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 GFM1Q96RP9 751 aaKnown RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 WACQ9BTA9 647 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 SARGQ9BW04 601 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 RBFOX1Q9NWB1 397 aaKnown RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 SIDT1Q9NXL6 827 aaKnown RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 MAT2BQ9NZL9 334 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 EXTL2Q9UBQ6 330 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PCDHGB7Q9Y5F8 929 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 F5P12259 2224 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PRICKLE3O43900 615 aaPredicted RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 MT-ND5P03915 603 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 TATDN3Q17R31 274 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 NOXA1Q86UR1 476 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 PAQR7Q86WK9 346 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 SDF2Q99470 211 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 SMAD5Q99717 465 aaKnown RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 CCDC3Q9BQI4 270 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 MCOLN1Q9GZU1 580 aa10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 RPRD1BQ9NQG5 326 aaKnown RBP10.9□□□□□ -0.66
CSPG4P3Y-201ENST00000418188 SLC22A31A6NKX4 558 aa10.89□□□□□ -0.67
CSPG4P3Y-201ENST00000418188 REM1O75628 298 aa10.89□□□□□ -0.67
CSPG4P3Y-201ENST00000418188 CPMP14384 443 aa10.89□□□□□ -0.67
CSPG4P3Y-201ENST00000418188 KIR2DL3P43628 341 aa10.89□□□□□ -0.67
CSPG4P3Y-201ENST00000418188 PPM1FP49593 454 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms