RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 TMEM200CA6NKL6 621 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 ENO4A6NNW6 628 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 E9PLN8 166 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 WWP2O00308 870 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 UPK1AO00322 258 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 HMGN4O00479 90 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 PRKNO60260 465 aaPredicted RBP15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 HMGN2P05204 90 aaKnown RBP15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 NUDT7P0C024 238 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 RAP2AP10114 183 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 NT5EP21589 574 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 PTGS2P35354 604 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 STT3AP46977 705 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 CHRNB3Q05901 458 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 MAP4K2Q12851 820 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 PRICKLE4Q2TBC4 344 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 TBCELQ5QJ74 424 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 REEP3Q6NUK4 255 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 ARHGAP11AQ6P4F7 1023 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 RTL4Q6ZR62 310 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 MDGA2Q7Z553 956 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 PATL1Q86TB9 770 aaKnown RBP15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 SLCO4A1Q96BD0 722 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 CTHRC1Q96CG8 243 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 SGCZQ96LD1 299 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 VKORC1Q9BQB6 163 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 ACTRT3Q9BYD9 372 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 VCX3BQ9H321 246 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 P2RX2Q9UBL9 471 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 AURKCQ9UQB9 309 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 UNC79Q9P2D8 2635 aa15.54■□□□□ 0.08
SCAMP4-204ENST00000414057 DIDO1Q9BTC0 2240 aaKnown RBP15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 C5orf58C9J3I9 102 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 HS6ST1O60243 411 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 CDC40O60508 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 COQ9O75208 318 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 PDE9AO76083 593 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 SERPINA1P01009 418 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 PTGER4P35408 488 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 PTDSS1P48651 473 aaKnown RBP15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 GPR85P60893 370 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 ADORA2A-AS1P86434 159 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 HSF1Q00613 529 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 PLGLB1Q02325 96 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 LTB4RQ15722 352 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 PRAMEF8Q5VWM4 474 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 PRAMEF7Q5VXH5 474 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 TNFAIP8L2Q6P589 184 aaPredicted RBP15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 CBLL1Q75N03 491 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 DOLPP1Q86YN1 238 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 GALNT12Q8IXK2 581 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 ADCY4Q8NFM4 1077 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 OR7G2Q8NG99 324 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 FAM57AQ8TBR7 257 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 KAT2AQ92830 837 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 OR51I1Q9H343 314 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 LIN28AQ9H9Z2 209 aaKnown RBP15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 ADPRHL2Q9NX46 363 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 MAT2BQ9NZL9 334 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 LIPT1Q9Y234 373 aa15.53■□□□□ 0.08
SCAMP4-204ENST00000414057 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 MYOCOSA0A1B0GUC4 107 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 CASQ2O14958 399 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 OR6B1O95007 311 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 CLDN14O95500 239 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 TFPTP0C1Z6 253 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 PTGER1P34995 402 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 SOX3P41225 446 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 PRKAG1P54619 331 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 SESN3P58005 492 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 ID2Q02363 134 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 LASP1Q14847 261 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 LRRC23Q53EV4 343 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 CDC73Q6P1J9 531 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 C16orf47Q6ZP98 133 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 LRRC74BQ6ZQY2 392 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 FKBP9P1Q75LS8 142 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 EIF3MQ7L2H7 374 aaKnown RBP15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 SLC22A16Q86VW1 577 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 LURAP1LQ8IV03 231 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 VWA5B2Q8N398 1253 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 NFKBIDQ8NI38 313 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 NUBPLQ8TB37 319 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 MAL2Q969L2 176 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 GIMAP5Q96F15 307 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 SENP5Q96HI0 755 aaPredicted RBP15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 CXorf21Q9HAI6 301 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 GIN1Q9NXP7 522 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 COQ3Q9NZJ6 369 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 CALML5Q9NZT1 146 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 PRDM4Q9UKN5 801 aa15.52■□□□□ 0.08
SCAMP4-204ENST00000414057 A0A1B0GTH9 108 aa15.52■□□□□ 0.07
SCAMP4-204ENST00000414057 TPOP07202 933 aa15.52■□□□□ 0.07
SCAMP4-204ENST00000414057 COX6B1P14854 86 aa15.52■□□□□ 0.07
SCAMP4-204ENST00000414057 FASP25445 335 aa15.52■□□□□ 0.07
SCAMP4-204ENST00000414057 VHLP40337 213 aa15.52■□□□□ 0.07
SCAMP4-204ENST00000414057 RFC3P40938 356 aa15.52■□□□□ 0.07
SCAMP4-204ENST00000414057 PCBP3P57721 371 aaKnown RBP15.52■□□□□ 0.07
SCAMP4-204ENST00000414057 RPS26P62854 115 aaKnown RBP15.52■□□□□ 0.07
SCAMP4-204ENST00000414057 PPIAP62937 165 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms