RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 FBXW5Q969U6 566 aa8.35□□□□□ -1.07
SIK3-202ENST00000413553 DDOQ99489 341 aa8.35□□□□□ -1.07
SIK3-202ENST00000413553 TEX12Q9BXU0 123 aa8.35□□□□□ -1.07
SIK3-202ENST00000413553 NKX2-4Q9H2Z4 354 aa8.35□□□□□ -1.07
SIK3-202ENST00000413553 SDHAF2Q9NX18 166 aa8.35□□□□□ -1.07
SIK3-202ENST00000413553 ICKQ9UPZ9 632 aa8.35□□□□□ -1.07
SIK3-202ENST00000413553 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 NEDD8-MDP1E9PL57 170 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 SOCS6O14544 535 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 TOR1AO14656 332 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 SLC2A10O95528 541 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 PEPDP12955 493 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 NPR2P20594 1047 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 ZP3P21754 424 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 IFNGR2P38484 337 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 MMP12P39900 470 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 MAPK9P45984 424 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 SELENOPP49908 381 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 ERVK-21P61565 698 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 IKZF1Q13422 519 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 CDC73Q6P1J9 531 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 WASH2PQ6VEQ5 465 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 RASSF6Q6ZTQ3 369 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 RTL10Q7L3V2 364 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 LSRQ86X29 649 aaPredicted RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 RASGRP3Q8IV61 690 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 SIRT6Q8N6T7 355 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 BMPERQ8N8U9 685 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 RASGEF1AQ8N9B8 481 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 CHST14Q8NCH0 376 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 OR52N1Q8NH53 320 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 GNPDA2Q8TDQ7 276 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 ZNF436Q9C0F3 470 aaPredicted RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 MS4A7Q9GZW8 240 aaPredicted RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 QRSL1Q9H0R6 528 aaKnown RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 NLGN3Q9NZ94 848 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 CHST2Q9Y4C5 530 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 MTCL1Q9Y4B5 1905 aaKnown RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 NUMA1Q14980 2115 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 PRAMEF27A3QJZ7 478 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 POM121CA8CG34 1229 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 ZNF593O00488 134 aaPredicted RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 CASC3O15234 703 aaKnown RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 RGS11O94810 467 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 C1orf105O95561 183 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 ALDOBP05062 364 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 FCER2P06734 321 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 DDX6P26196 483 aaKnown RBP eCLIP8.34□□□□□ -1.07
SIK3-202ENST00000413553 GPR4P46093 362 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 BLVRAP53004 296 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 SLC3A1Q07837 685 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 GRIN2CQ14957 1233 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 OPCMLQ14982 345 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 TMEM220Q6QAJ8 160 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 NXPE4Q6UWF7 544 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 Q6ZNB5 142 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 Q6ZVU0 165 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 FGD2Q7Z6J4 655 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 SLC9B2Q86UD5 537 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 OR6M1Q8NGM8 313 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 OR2T4Q8NH00 348 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 OR4Q3Q8NH05 313 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 ZCCHC3Q9NUD5 404 aaKnown RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 MRPL15Q9P015 296 aaKnown RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 KCMF1Q9P0J7 381 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 COPZ2Q9P299 210 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 SLC13A4Q9UKG4 626 aa8.34□□□□□ -1.07
SIK3-202ENST00000413553 SIRT4Q9Y6E7 314 aaPredicted RBP8.34□□□□□ -1.07
SIK3-202ENST00000413553 EYSQ5T1H1 3165 aa8.34□□□□□ -1.08
SIK3-202ENST00000413553 TEX46H3BTG2 121 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 PLPP1O14494 284 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 HPXP02790 462 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 THBS2P35442 1172 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 ZP1P60852 638 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 TSPAN31Q12999 210 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 BAMBIQ13145 260 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 TUSC1Q2TAM9 212 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 SLC25A35Q3KQZ1 300 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 PIP5KL1Q5T9C9 394 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 ESPNLQ6ZVH7 1005 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 NLRC3Q7RTR2 1065 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 METTL3Q86U44 580 aaKnown RBP8.33□□□□□ -1.08
SIK3-202ENST00000413553 CFAP206Q8IYR0 622 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 KLK6Q92876 244 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 YIPF5Q969M3 257 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 KLHL15Q96M94 604 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 ALG8Q9BVK2 526 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 SIRT3Q9NTG7 399 aaPredicted RBP8.33□□□□□ -1.08
SIK3-202ENST00000413553 AHSPQ9NZD4 102 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 BAIAP2Q9UQB8 552 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 NUP210Q8TEM1 1887 aaPredicted RBP8.33□□□□□ -1.08
SIK3-202ENST00000413553 A0A0G2JN53 185 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 SLC5A10A0PJK1 596 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 ZC3H12DA2A288 527 aaKnown RBP8.33□□□□□ -1.08
SIK3-202ENST00000413553 HNRNPCL2B2RXH8 293 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 PRR23D1E9PI22 279 aaPredicted RBP8.33□□□□□ -1.08
SIK3-202ENST00000413553 PGRMC2O15173 223 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 SURF4O15260 269 aa8.33□□□□□ -1.08
SIK3-202ENST00000413553 GREM1O60565 184 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms