RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 FBXL3Q9UKT7 428 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 CCL27Q9Y4X3 112 aa13.07□□□□□ -0.32
CLTCL1-201ENST00000412649 M0R036 132 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 FRS3O43559 492 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 SNAPINO95295 136 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC6A1P30531 599 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 NAA10P41227 235 aaPredicted RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 CCR4P51679 360 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 SORDQ00796 357 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 PUS10Q3MIT2 529 aaKnown RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 KLHDC9Q8NEP7 349 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 OR4C15Q8NGM1 316 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 HAVCR1Q96D42 359 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 TRMT61AQ96FX7 289 aaKnown RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 C4orf36Q96KX1 117 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 CNTNAP3BQ96NU0 1288 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 B3GAT2Q9NPZ5 323 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 GPN3Q9UHW5 284 aaPredicted RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 BACE2Q9Y5Z0 518 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 C8orf89P0DMQ9 161 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 PRPH2P23942 346 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 HOXD10P28358 340 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 CCR9P51686 369 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 ARF5P84085 180 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 POU4F2Q12837 409 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 RPL13AP3Q6NVV1 102 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF322Q6U7Q0 402 aaPredicted RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 RNF165Q6ZSG1 346 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 BHLHA9Q7RTU4 235 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF546Q86UE3 836 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 TMPRSS12Q86WS5 348 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 RBM45Q8IUH3 476 aaKnown RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 TMEM184CQ9NVA4 438 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 WDR45Q9Y484 360 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 COL5A3P25940 1745 aaPredicted RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 MEIKINA0A087WXM9 373 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 KCNJ5P48544 419 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 PRKXP51817 358 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 FAM110CQ1W6H9 321 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 OR51A7Q8NH64 312 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 GRHL3Q8TE85 626 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 THAP4Q8WY91 577 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 C13orf42A0A1B0GVH6 325 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 CD2P06729 351 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 NAT2P11245 290 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF10P21506 573 aaPredicted RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 S100A2P29034 98 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC6A6P31641 620 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 C12orf73Q69YU5 71 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 ARMC10Q8N2F6 343 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 CHST4Q8NCG5 386 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 RNASE11Q8TAA1 199 aaKnown RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 ABHD4Q8TB40 342 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 SETD7Q8WTS6 366 aaKnown RBP13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 TAPBPLQ9BX59 468 aa13.06□□□□□ -0.32
CLTCL1-201ENST00000412649 OR5K3A6NET4 321 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ELOA3DA6NLF2 546 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 AGAP14A8MT82 685 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 RGS11O94810 467 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ADH7P40394 386 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 SPINT3P49223 89 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 BIKQ13323 160 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNHIT3Q15649 155 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ELOA3BQ3SY89 546 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ELOA3Q8NG57 546 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ARL5BQ96KC2 179 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC38A3Q99624 504 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 FGF20Q9NP95 211 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 DLL4Q9NR61 685 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 CYSLTR2Q9NS75 346 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 MED17Q9NVC6 651 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 SH2B3Q9UQQ2 575 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 LIPT1Q9Y234 373 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 SULT1B1O43704 296 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 AGR2O95994 175 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ITGA3P26006 1051 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ACADLP28330 430 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 TMEM115Q12893 351 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 UBE2NLQ5JXB2 153 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 PIP5KL1Q5T9C9 394 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 GDF6Q6KF10 455 aaPredicted RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 C22orf39Q6P5X5 142 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 CCDC116Q8IYX3 515 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 NPLOC4Q8TAT6 608 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 TCEAL7Q9BRU2 100 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 PINK1Q9BXM7 581 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 SLC6A17Q9H1V8 727 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 CXorf36Q9H7Y0 433 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 PDFQ9HBH1 243 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 C1GALT1Q9NS00 363 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 MRTO4Q9UKD2 239 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 MKL2Q9ULH7 1088 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 FARSAQ9Y285 508 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 NDUFS4O43181 175 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ERI3O43414 337 aaKnown RBP13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 PIP5K1CO60331 668 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 ZNF35P13682 527 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 GABRR2P28476 465 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 TRIM23P36406 574 aa13.05□□□□□ -0.32
CLTCL1-201ENST00000412649 TP53I3Q53FA7 332 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms