RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ATP5F1P24539 256 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 IDUAP35475 653 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PKNOX1P55347 436 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 RAC1P63000 192 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNF844Q08AG5 666 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 LCP2Q13094 533 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CPTPQ5TA50 214 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 HMBOX1Q6NT76 420 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ADAM5Q6NVV9 412 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SYT10Q6XYQ8 523 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GTPBP8Q8N3Z3 284 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CEP112Q8N8E3 955 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 STEAP2Q8NFT2 490 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 OR2V1Q8NHB1 315 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 LILRB1Q8NHL6 650 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GPR151Q8TDV0 419 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 S100PBPQ96BU1 408 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TACO1Q9BSH4 297 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 REG4Q9BYZ8 158 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TMEM185BQ9H7F4 350 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 MYNNQ9NPC7 610 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 EQTNQ9NQ60 294 aa12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 POLR3HQ9Y535 204 aaPredicted RBP12.72□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ATRQ13535 2644 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 A0A0J9YW62 118 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TTC36A6NLP5 189 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 RNF212BA8MTL3 300 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ALG1L2C9J202 215 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 OVOL3O00110 214 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 CLOCKO15516 846 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TUBBP07437 444 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 AGTR1P30556 359 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PRKAA2P54646 552 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 FOXA1P55317 472 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ETF1P62495 437 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ETFDHQ16134 617 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 IMPG1Q17R60 797 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 PDSS1Q5T2R2 415 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 HBMQ6B0K9 141 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GTF2IRD2BQ6EKJ0 949 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ESPNLQ6ZVH7 1005 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZNF551Q7Z340 670 aaPredicted RBP12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GTF2IRD2Q86UP8 949 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SLC22A9Q8IVM8 553 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 MMGT1Q8N4V1 131 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GATSQ8NAP1 163 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 OR4C3Q8NH37 302 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ROBO4Q8WZ75 1007 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 OSTF1Q92882 214 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 FBXW5Q969U6 566 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 GTPBP3Q969Y2 492 aaKnown RBP12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 ZBTB8AQ96BR9 441 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 L3HYPDHQ96EM0 354 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 RNF145Q96MT1 663 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 HDHD5Q9BXW7 423 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 TSPYL1Q9H0U9 437 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 HHATLQ9HCP6 504 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 MID1IP1Q9NPA3 183 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 FBXO34Q9NWN3 711 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 RNF115Q9Y4L5 304 aa12.71□□□□□ -0.37
HLA-DQB2-229ENST00000411527 SONP18583 2426 aaKnown RBP12.71□□□□□ -0.38
HLA-DQB2-229ENST00000411527 A0A087WUV0 522 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 A0A1W2PRB8 838 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NKX2-2O95096 273 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 OXSR1O95747 527 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CD3EP07766 207 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SOD3P08294 240 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 DANCRP0C864 163 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PRPS2P11908 318 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ME2P23368 584 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 PSMA4P25789 261 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ACVR1BP36896 505 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CDKN1AP38936 164 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ZNF41P51814 821 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 CARD18P57730 90 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SLC18A2Q05940 514 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 HSPB3Q12988 150 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SLC29A2Q14542 456 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TSC22D1Q15714 1073 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 VPS26BQ4G0F5 336 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NCMAPQ5T1S8 102 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 TIFABQ6ZNK6 161 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SMAP2Q8WU79 429 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NANOS1Q8WY41 292 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 IFT81Q8WYA0 676 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NEUROG1Q92886 237 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 SH3YL1Q96HL8 342 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 REXO5Q96IC2 774 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ESRP2Q9H6T0 727 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 NGBQ9NPG2 151 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 YAE1D1Q9NRH1 226 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 MED17Q9NVC6 651 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 LIPT1Q9Y234 373 aa12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 WBP11Q9Y2W2 641 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB2-229ENST00000411527 ABCA1O95477 2261 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 FREM1Q5H8C1 2179 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 EXOC1LA0A1B0GW35 172 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 C7orf72A4D263 438 aa12.69□□□□□ -0.38
HLA-DQB2-229ENST00000411527 UBFD1O14562 309 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms