RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 SFTPA2Q8IWL1 248 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 GHDCQ8N2G8 530 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SLC25A45Q8N413 288 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 EID2Q8N6I1 236 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 L3MBTL4Q8NA19 623 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 FNDC5Q8NAU1 212 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 BEND2Q8NDZ0 799 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 OR5M3Q8NGP4 307 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 OR13C4Q8NGS5 318 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CCL4L1Q8NHW4 92 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 C9orf43Q8TAL5 461 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 FAM110DQ8TAY7 271 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 LMX1AQ8TE12 382 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SAP25Q8TEE9 199 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 RAD51AP1Q96B01 352 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SPSB1Q96BD6 273 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 RTP4Q96DX8 246 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 RNF31Q96EP0 1072 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 LYSMD1Q96S90 227 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SORT1Q99523 831 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ASCL2Q99929 193 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 EFHD1Q9BUP0 239 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 APOOQ9BUR5 198 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 LRRC61Q9BV99 259 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 SCNM1Q9BWG6 230 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 FRMD8Q9BZ67 464 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 FBXO8Q9NRD0 319 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PNPLA3Q9NST1 481 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ACOXLQ9NUZ1 547 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 B3GNT2Q9NY97 397 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 OR6C3Q9NZP0 311 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 MALT1Q9UDY8 824 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 APOBEC3BQ9UH17 382 aaKnown RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 STEAP1Q9UHE8 339 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 IL17BQ9UHF5 180 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 ADAMTS6Q9UKP5 1117 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 CDC14AQ9UNH5 594 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PSMD13Q9UNM6 376 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PRELID3BQ9Y3B1 194 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 PCYT1BQ9Y5K3 369 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 HS3ST3A1Q9Y663 406 aa4.26□□□□□ -1.73
SF3B1-202ENST00000409915 OAS3Q9Y6K5 1087 aaKnown RBP4.26□□□□□ -1.73
SF3B1-202ENST00000409915 FRYQ5TBA9 3013 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 MYLKQ15746 1914 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CABIN1Q9Y6J0 2220 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CACNA1AO00555 2505 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 A0A087WXM4 84 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 A0A0B4J293 547 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 A0A0G2JMP0 313 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 TCRBV7S3A2A0A539 114 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PQLC2LA1A4F0 135 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 HEATR9A2RTY3 570 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 GSAPA4D1B5 854 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PMS2P1A4D2B8 440 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 OR51F1A6NGY5 319 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ACOD1A6NK06 481 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CGB1A6NKQ9 187 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 C17orf100A8MU93 164 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 KIAA1324LA8MWY0 1029 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 TARM1B6A8C7 271 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 H3BMQ9 156 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 GAPDHSO14556 408 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 FLRT2O43155 660 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 NIPSNAP2O75323 286 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 RHBDL1O75783 438 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 TOX4O94842 621 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 AP2A1O95782 977 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 TOP3BO95985 862 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CH25HO95992 272 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ALDOAP04075 364 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CSF2P04141 144 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 JUNP05412 331 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 APRTP07741 180 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CHRM2P08172 466 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF883P0CG24 379 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PRSS56P0CW18 603 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 GIMD1P0DJR0 217 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CDH1P12830 882 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 GFAPP14136 432 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SPINK2P20155 84 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 EDN2P20800 178 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 DGKAP23743 735 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SLC6A2P23975 617 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PIK3R1P27986 724 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 PTPN6P29350 595 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SERPINB5P36952 375 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 HPCAL1P37235 193 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 COILP38432 576 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SPAM1P38567 509 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 DDOSTP39656 456 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ZNF140P52738 457 aaPredicted RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 DGKQP52824 942 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CLRN1P58418 232 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 DCDC1P59894 354 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 RAB14P61106 215 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 HNRNPKP61978 463 aaKnown RBP eCLIP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 ESRRGP62508 458 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 EEF1A1P68104 462 aaKnown RBP4.25□□□□□ -1.73
SF3B1-202ENST00000409915 CRADDP78560 199 aa4.25□□□□□ -1.73
SF3B1-202ENST00000409915 SIM1P81133 766 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms