RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 PTPMT1Q8WUK0 201 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-206ENST00000409754 VCX3AQ9NNX9 186 aa13.04□□□□□ -0.32
LIMS2-206ENST00000409754 CTPS2Q9NRF8 586 aa13.04□□□□□ -0.32
LIMS2-206ENST00000409754 SCN3BQ9NY72 215 aa13.04□□□□□ -0.32
LIMS2-206ENST00000409754 RNF6Q9Y252 685 aa13.04□□□□□ -0.32
LIMS2-206ENST00000409754 DTX4Q9Y2E6 619 aa13.04□□□□□ -0.32
LIMS2-206ENST00000409754 KIF26BQ2KJY2 2108 aa13.04□□□□□ -0.32
LIMS2-206ENST00000409754 A0A087WUU8 490 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 NPIPA5A0A0B4J1W7 369 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 TCRBV16S1A1N1A0A5B0 115 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 SYNDIG1LA6NDD5 238 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 NPIPA7E9PJI5 369 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 FMO6PO60774 539 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 WBP4O75554 376 aaKnown RBP13.03□□□□□ -0.32
LIMS2-206ENST00000409754 NPIPA8P0DM63 369 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 CT45A8P0DMV1 189 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 CT45A9P0DMV2 189 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 JUNBP17275 347 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-206ENST00000409754 FMO3P31513 532 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 IFNGR2P38484 337 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 ZNF136P52737 540 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 DAB2P98082 770 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 PTGES3Q15185 160 aaKnown RBP13.03□□□□□ -0.32
LIMS2-206ENST00000409754 CNPY1Q3B7I2 92 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 ZBED5Q49AG3 693 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 CT45A2Q5DJT8 189 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 MFSD4BQ5TF39 518 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 C1orf189Q5VU69 101 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 DHRS13Q6UX07 377 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 GPR141Q7Z602 305 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 ZER1Q7Z7L7 766 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 ZAR1Q86SH2 424 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 MARCH9Q86YJ5 346 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 TMEM151BQ8IW70 566 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 RCBTB1Q8NDN9 531 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 OR4N2Q8NGD1 307 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 RHOXF1Q8NHV9 184 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 APH1BQ8WW43 257 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 TSLPQ969D9 159 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 TMIGD2Q96BF3 282 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 SLC41A3Q96GZ6 507 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 SENP5Q96HI0 755 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-206ENST00000409754 CCDC74BQ96LY2 380 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 TUBA1CQ9BQE3 449 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 G6PC3Q9BUM1 346 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 PRR14Q9BWN1 585 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 ITPAQ9BY32 194 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 DUSP21Q9H596 190 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 POLR1BQ9H9Y6 1135 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 PNO1Q9NRX1 252 aaKnown RBP13.03□□□□□ -0.32
LIMS2-206ENST00000409754 RASSF1Q9NS23 344 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 PCDHGA10Q9Y5H3 936 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 CEPT1Q9Y6K0 416 aa13.03□□□□□ -0.32
LIMS2-206ENST00000409754 XPNPEP2O43895 674 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 MRPS14O60783 128 aaKnown RBP13.02□□□□□ -0.32
LIMS2-206ENST00000409754 RFPL3O75679 317 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 IGKV1D-16P01601 117 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 HTR1AP08908 422 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 GSTM3P21266 225 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 SDHBP21912 280 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 MMP11P24347 488 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 TTKP33981 857 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 IDH2P48735 452 aaKnown RBP13.02□□□□□ -0.32
LIMS2-206ENST00000409754 PSMD4P55036 377 aaKnown RBP13.02□□□□□ -0.32
LIMS2-206ENST00000409754 CDC42P60953 191 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 HOXC5Q00444 222 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 ELAVL1Q15717 326 aaKnown RBP13.02□□□□□ -0.32
LIMS2-206ENST00000409754 ZNF141Q15928 474 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 DECR1Q16698 335 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 ZSWIM7Q19AV6 140 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 GDF7Q7Z4P5 450 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 GRAMD2AQ8IUY3 354 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 SPARTQ8N0X7 666 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 UBE2FQ969M7 185 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 OR6C1Q96RD1 312 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 SLC7A5P2Q9GIP4 190 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 SYNDIG1Q9H7V2 258 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 PAK1IP1Q9NWT1 392 aaPredicted RBP13.02□□□□□ -0.32
LIMS2-206ENST00000409754 SIDT1Q9NXL6 827 aaKnown RBP13.02□□□□□ -0.32
LIMS2-206ENST00000409754 ZNF226Q9NYT6 803 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 AASSQ9UDR5 926 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 TESQ9UGI8 421 aaKnown RBP13.02□□□□□ -0.32
LIMS2-206ENST00000409754 RARRES3Q9UL19 164 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 CBLCQ9ULV8 474 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 CFL2Q9Y281 166 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 NUP210LQ5VU65 1888 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 CELSR3Q9NYQ7 3312 aa13.02□□□□□ -0.32
LIMS2-206ENST00000409754 PTGES3LE9PB15 166 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 NPIPB9F8W1W9 429 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 MPZL2O60487 215 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 GABRB1P18505 474 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 DRD5P21918 477 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 RORAP35398 523 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 KRT20P35900 424 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 GSSP48637 474 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 SLC37A1P57057 533 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 SLC35A2P78381 396 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 INSM1Q01101 510 aaPredicted RBP13.02□□□□□ -0.33
LIMS2-206ENST00000409754 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms