RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ARFGAP1Q8N6T3 406 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 OR6C4Q8NGE1 309 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 OR5AK2Q8NH90 309 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 CHPT1Q8WUD6 406 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 RBM14Q96PK6 669 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 CNN2Q99439 309 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 PLSCR3Q9NRY6 295 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 C14orf119Q9NWQ9 140 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 HCFC2Q9Y5Z7 792 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 ERVFC1P60507 584 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 KIAA1614Q5VZ46 1190 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SYT4Q9H2B2 425 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 MARCH4Q9P2E8 410 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TRAPPC2LQ9UL33 140 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 I3L521 148 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 M0R1B8 84 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 OR8U9P0C7N5 309 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 GSK3BP49841 420 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 ERVK-25P63136 954 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SF3B4Q15427 424 aaKnown RBP eCLIP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TP53I3Q53FA7 332 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SLC27A4Q6P1M0 643 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 RBMXL3Q8N7X1 1067 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 PHOX2BQ99453 314 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 CDC6Q99741 560 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 FAM120CQ9NX05 1096 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 GPR160Q9UJ42 338 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 GMEB1Q9Y692 573 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 CSNK1G3Q9Y6M4 447 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 LOC105369274A0A096LPK9 316 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 A0A1W2PRV1 198 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 E9PI62 339 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SMAD6O43541 496 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SNHG28P0DPA3 235 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 P2RX1P51575 399 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 AFF3P51826 1226 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 SHHQ15465 462 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 MPPED2Q15777 294 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 OR4N4Q8N0Y3 316 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 PLEKHO2Q8TD55 490 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 NKD2Q969F2 451 aaPredicted RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TRMT61AQ96FX7 289 aaKnown RBP7.94□□□□□ -1.14
SCN9A-203ENST00000409672 PRDM9Q9NQV7 894 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 TUBG2Q9NRH3 451 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 CDH10Q9Y6N8 788 aa7.94□□□□□ -1.14
SCN9A-203ENST00000409672 OR5H15A6NDH6 313 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 OR5H14A6NHG9 310 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 OR5H1A6NKK0 313 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 MGST1P10620 155 aaKnown RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 FAM189A2Q15884 450 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM176BQ3YBM2 270 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 FAM78AQ5JUQ0 283 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 EXOSC6Q5RKV6 272 aaKnown RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 CD163Q86VB7 1156 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 GID4Q8IVV7 300 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 MSI2Q96DH6 328 aaKnown RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 MRGPRX2Q96LB1 330 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 ARMC1Q9NVT9 282 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 GSRP00390 522 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 ALDOBP05062 364 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 KCNE1P15382 129 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 TIA1P31483 386 aaKnown RBP eCLIP7.93□□□□□ -1.148e-10■■■■□ 22.6
SCN9A-203ENST00000409672 PTGIRP43119 386 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 S100A12P80511 92 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 SLC25A11Q02978 314 aaKnown RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 STEAP4Q687X5 459 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF836Q6ZNA1 936 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 TMPRSS7Q7RTY8 843 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM110Q86TL2 294 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM104Q8NE00 496 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 OR5L1Q8NGL2 311 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 FAM124BQ9H5Z6 455 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 GPATCH2Q9NW75 528 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM131LA2VDJ0 1609 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 GPR39O43194 453 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 AQP9O43315 295 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 PIP5K1CO60331 668 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 PHC1P78364 1004 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 OR4D1Q15615 310 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM200AQ86VY9 491 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 DEFB108BQ8NET1 73 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 OR52B6Q8NGF0 335 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM40Q8WWA1 233 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 APIPQ96GX9 242 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 TP63Q9H3D4 680 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 ARFGEF2Q9Y6D5 1785 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 LCHNA4D1U4 455 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 FESP07332 822 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 P2RY14Q15391 338 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 NTAN1Q96AB6 310 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 DPCDQ9BVM2 203 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 CD93Q9NPY3 652 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF142P52746 1687 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 HS3ST1O14792 307 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 F13BP05160 661 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 CAMLGP49069 296 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 INHBCP55103 352 aa7.93□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF829Q3KNS6 432 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 C2CD4AQ8NCU7 369 aaPredicted RBP7.93□□□□□ -1.14
SCN9A-203ENST00000409672 C7orf26Q96N11 449 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms