RNA–Protein interactions for RNA: ENST00000409441.5

LIMS1-204, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-204ENST00000409441 FBXL4Q9UKA2 621 aa12.43□□□□□ -0.42
LIMS1-204ENST00000409441 POFUT2Q9Y2G5 429 aa12.43□□□□□ -0.42
LIMS1-204ENST00000409441 TESMINQ9Y4I5 508 aa12.43□□□□□ -0.42
LIMS1-204ENST00000409441 FRYQ5TBA9 3013 aa12.43□□□□□ -0.42
LIMS1-204ENST00000409441 NUP210LQ5VU65 1888 aa12.43□□□□□ -0.42
LIMS1-204ENST00000409441 ACACAQ13085 2346 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 NSG1A0A0A6YYJ2 146 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 TMEM247A6NEH6 219 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 SAGE2PA6NJ88 616 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 DDAH2O95865 285 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 HPP00738 406 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 CT62P0C5K7 136 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 ITPKBP27987 946 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 SOX18P35713 384 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 CCT3P49368 545 aaKnown RBP12.42□□□□□ -0.42
LIMS1-204ENST00000409441 ANXA11P50995 505 aaKnown RBP12.42□□□□□ -0.42
LIMS1-204ENST00000409441 GPR143P51810 404 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 HMGA2P52926 109 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 MICAQ29983 383 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 ZNF628Q5EBL2 1059 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 TMEM107Q6UX40 140 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 ZNF605Q86T29 641 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 KDF1Q8NAX2 398 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-204ENST00000409441 NFAM1Q8NET5 270 aaPredicted RBP12.42□□□□□ -0.42
LIMS1-204ENST00000409441 OR10G2Q8NGC3 310 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 ZNF675Q8TD23 568 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 MOAP1Q96BY2 351 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 CTHRC1Q96CG8 243 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 ELP4Q96EB1 424 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 HRASLS5Q96KN8 279 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 SLC35G5Q96KT7 338 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 NODALQ96S42 347 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 CNPPD1Q9BV87 410 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 ZNF160Q9HCG1 818 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 CCNB1IP1Q9NPC3 277 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 SCN3BQ9NY72 215 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 MAT2BQ9NZL9 334 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 ENOPH1Q9UHY7 261 aa12.42□□□□□ -0.42
LIMS1-204ENST00000409441 FAM32AQ9Y421 112 aaKnown RBP12.42□□□□□ -0.42
LIMS1-204ENST00000409441 IGF2RP11717 2491 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 A0A087WV48 116 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 MASP2O00187 686 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 IFNW1P05000 195 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 TFPTP0C1Z6 253 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 CD247P20963 164 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 S1PR1P21453 382 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 SLC26A5P58743 744 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 FOXK2Q01167 660 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 TEKQ02763 1124 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 FUT7Q11130 342 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 CDC20Q12834 499 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
LIMS1-204ENST00000409441 GPR107Q5VW38 600 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 GTF2IRD2BQ6EKJ0 949 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 BHLHB9Q6PI77 547 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 DHRS4L2Q6PKH6 230 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 GTF2IRD2Q86UP8 949 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 VWA5B2Q8N398 1253 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 ZNF321PQ8N8H1 164 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 B3GNT7Q8NFL0 401 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 BPIFB6Q8NFQ5 453 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 OR7G2Q8NG99 324 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 SLC2A12Q8TD20 617 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 ZNF721Q8TF20 911 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 SLC38A5Q8WUX1 472 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 MUL1Q969V5 352 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 TMEM19Q96HH6 336 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 ZNF607Q96SK3 696 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 SH3GL3Q99963 347 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 DUSP21Q9H596 190 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 ANKRA2Q9H9E1 313 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 P2RX2Q9UBL9 471 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 PPIEQ9UNP9 301 aaKnown RBP12.41□□□□□ -0.42
LIMS1-204ENST00000409441 ERVK-19Q9WJR5 959 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 CHD8Q9HCK8 2581 aa12.41□□□□□ -0.42
LIMS1-204ENST00000409441 PRAMEF25A6NGN4 478 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 H3BMQ9 156 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 HMGN4O00479 90 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 PLOD3O60568 738 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 SLITRK5O94991 958 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 MFN2O95140 757 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 BCHEP06276 602 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 HTR1AP08908 422 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 CYP4B1P13584 511 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 ICAM2P13598 275 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 SSTR4P31391 388 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 MC3RP41968 323 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 LIMS1P48059 325 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 KHKP50053 298 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 CDH12P55289 794 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 RPP38P78345 283 aaKnown RBP12.4□□□□□ -0.42
LIMS1-204ENST00000409441 EXOSC7Q15024 291 aaKnown RBP12.4□□□□□ -0.42
LIMS1-204ENST00000409441 EXT1Q16394 746 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 BTBD16Q32M84 506 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 DCAF10Q5QP82 559 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 PLAG1Q6DJT9 500 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 TNFAIP8L2Q6P589 184 aaPredicted RBP12.4□□□□□ -0.42
LIMS1-204ENST00000409441 LGI4Q8N135 537 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 SIMC1Q8NDZ2 872 aa12.4□□□□□ -0.42
LIMS1-204ENST00000409441 OR1N1Q8NGS0 311 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms