RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TPOP07202 933 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 LSP1P33241 339 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 SEC24CP53992 1094 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 GYS2P54840 703 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 FUT5Q11128 374 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.05■□□□□ 0.483e-8■■■■■ 44.2
PDLIM2-207ENST00000409417 YRDCQ86U90 279 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 MISPQ8IVT2 679 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 OR2M3Q8NG83 312 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 C10orf82Q8WW14 230 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 ROPN1LQ96C74 230 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 TRNT1Q96Q11 434 aaKnown RBP18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 PTGES2Q9H7Z7 377 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 SAR1AQ9NR31 198 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 TAS2R10Q9NYW0 307 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 MED11Q9P086 117 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 SLAMF8Q9P0V8 285 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 SPRR3Q9UBC9 169 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 SH3BGRL2Q9UJC5 107 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 NDUFAF1Q9Y375 327 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 NCKAP5O14513 1909 aa18.05■□□□□ 0.48
PDLIM2-207ENST00000409417 FREM3P0C091 2139 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 PRAMEF27A3QJZ7 478 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 CCL21O00585 134 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 ZIC2O95409 532 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 DPP4P27487 766 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 DSCR4P56555 118 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 GXYLT1Q4G148 440 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 NHSL2Q5HYW2 709 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 WIPI1Q5MNZ9 446 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 CD163Q86VB7 1156 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 FJX1Q86VR8 437 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 OR14L1PQ8NHC6 308 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 SAP130Q9H0E3 1048 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 SLC25A37Q9NYZ2 338 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 TNFRSF10DQ9UBN6 386 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 LEF1Q9UJU2 399 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 DKKL1Q9UK85 242 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 MKLN1Q9UL63 735 aa18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 SPTBN1Q01082 2364 aaKnown RBP18.04■□□□□ 0.48
PDLIM2-207ENST00000409417 C15orf38-AP3S2A0A0A6YYH1 394 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 NPIPA5A0A0B4J1W7 369 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 NPIPA7E9PJI5 369 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 H3BNH8 94 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 CLIC1O00299 241 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 ANGPT2O15123 496 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 ZIC3O60481 467 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 SNRPB2P08579 225 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 NPIPA8P0DM63 369 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 MSX1P28360 303 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 GCKP35557 465 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 CRATP43155 626 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 HPCAP84074 193 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 GANABQ14697 944 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 GPR68Q15743 365 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 CD226Q15762 336 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 ZNF141Q15928 474 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 EMC4Q5J8M3 183 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 VASNQ6EMK4 673 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 MTERF4Q7Z6M4 381 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 MSRB3Q8IXL7 192 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 DPP10Q8N608 796 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 GATSQ8NAP1 163 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 OIT3Q8WWZ8 545 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 RAD21L1Q9H4I0 556 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 THUMPD1Q9NXG2 353 aaKnown RBP18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 SLC6A5Q9Y345 797 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 WDR45Q9Y484 360 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 DTNAQ9Y4J8 743 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 GMEB1Q9Y692 573 aa18.03■□□□□ 0.48
PDLIM2-207ENST00000409417 WIPF3A6NGB9 483 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 KIAA0513O60268 411 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 LDLRP01130 860 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 PER3P56645 1201 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 RGNQ15493 299 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 GPAT3Q53EU6 434 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 WLSQ5T9L3 541 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 TYW3Q6IPR3 259 aaKnown RBP18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 DLEU7Q6UYE1 221 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 FRRS1Q6ZNA5 592 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 OLIG3Q7RTU3 272 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 EID3Q8N140 333 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 C1GALT1C1Q96EU7 318 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 TIMP4Q99727 224 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 TP63Q9H3D4 680 aaPredicted RBP18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 PNPLA3Q9NST1 481 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 VAPAQ9P0L0 249 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 KCNE5Q9UJ90 142 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 PCNX1Q96RV3 2341 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 PTPN13Q12923 2485 aa18.02■□□□□ 0.48
PDLIM2-207ENST00000409417 TRBV5-3A0A0A0MS03 114 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 GMNCA6NCL1 334 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 E9PLN8 166 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 H6PDO95479 791 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ACTL6AO96019 429 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 NR2F1P10589 423 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ETFAP13804 333 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 BMP7P18075 431 aa18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 PPIBP23284 216 aaKnown RBP18.01■□□□□ 0.47
PDLIM2-207ENST00000409417 ADSLP30566 484 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms