RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 C1orf52Q8N6N3 182 aaKnown RBP6.94□□□□□ -1.3
LSM5-202ENST00000409292 FADS6Q8N9I5 356 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 OR4F6Q8NGB9 312 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 OR9A2Q8NGT5 310 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 FBF1Q8TES7 1133 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 DUSP19Q8WTR2 217 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 SMAP2Q8WU79 429 aaPredicted RBP6.94□□□□□ -1.3
LSM5-202ENST00000409292 HSD17B8Q92506 261 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 KAT2AQ92830 837 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 EXOSC8Q96B26 276 aaKnown RBP6.94□□□□□ -1.3
LSM5-202ENST00000409292 ARL8AQ96BM9 186 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 TM4SF18Q96CE8 201 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 MUCL1Q96DR8 90 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 MRRFQ96E11 262 aaKnown RBP6.94□□□□□ -1.3
LSM5-202ENST00000409292 PHF21BQ96EK2 531 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 C1GALT1C1Q96EU7 318 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 CNRIP1Q96F85 164 aaPredicted RBP6.94□□□□□ -1.3
LSM5-202ENST00000409292 MARK4Q96L34 752 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 VSTM2LQ96N03 204 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 NAPGQ99747 312 aaPredicted RBP6.94□□□□□ -1.3
LSM5-202ENST00000409292 L2HGDHQ9H9P8 463 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 FOLH1BQ9HBA9 442 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 ZBTB26Q9HCK0 441 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 SLC35C2Q9NQQ7 365 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 DDX18Q9NVP1 670 aaKnown RBP6.94□□□□□ -1.3
LSM5-202ENST00000409292 MED11Q9P086 117 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 XPR1Q9UBH6 696 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 MCM8Q9UJA3 840 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 ZNF469Q96JG9 3925 aaPredicted RBP6.94□□□□□ -1.3
LSM5-202ENST00000409292 STAB1Q9NY15 2570 aa6.94□□□□□ -1.3
LSM5-202ENST00000409292 EXPH5Q8NEV8 1989 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 A0A087WV62 115 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 OR7A17O14581 309 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 PHF1O43189 567 aaPredicted RBP6.93□□□□□ -1.3
LSM5-202ENST00000409292 PCDH7O60245 1069 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 ULK1O75385 1050 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 PDYNP01213 254 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 INHBAP08476 426 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 IL3P08700 152 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 COL6A2P12110 1019 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 HNF1AP20823 631 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 MAGEA4P43358 317 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 SUCLG1P53597 346 aaKnown RBP6.93□□□□□ -1.3
LSM5-202ENST00000409292 PLTPP55058 493 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 CLDN20P56880 219 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 IRF9Q00978 393 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 FAPQ12884 760 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 CSTF3Q12996 717 aaKnown RBP6.93□□□□□ -1.3
LSM5-202ENST00000409292 RASA2Q15283 850 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 RNPS1Q15287 305 aaKnown RBP6.93□□□□□ -1.3
LSM5-202ENST00000409292 AGAP6Q5VW22 663 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 ESPNLQ6ZVH7 1005 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 MISPQ8IVT2 679 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 PHC2Q8IXK0 858 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 CENPLQ8N0S6 344 aaPredicted RBP6.93□□□□□ -1.3
LSM5-202ENST00000409292 CDYL2Q8N8U2 506 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 OR2V1Q8NHB1 315 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 KISS1RQ969F8 398 aaPredicted RBP6.93□□□□□ -1.3
LSM5-202ENST00000409292 ZBTB8AQ96BR9 441 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 RADILQ96JH8 1075 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 TMEM204Q9BSN7 226 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 SHARPINQ9H0F6 387 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 SLCO5A1Q9H2Y9 848 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 AKTIPQ9H8T0 292 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 PCTPQ9UKL6 214 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 GRID1Q9ULK0 1009 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 CLEC4AQ9UMR7 237 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 LIPT1Q9Y234 373 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 SONP18583 2426 aaKnown RBP6.93□□□□□ -1.3
LSM5-202ENST00000409292 ABCA1O95477 2261 aa6.93□□□□□ -1.3
LSM5-202ENST00000409292 UBFD1O14562 309 aaKnown RBP6.92□□□□□ -1.3
LSM5-202ENST00000409292 CXCL13O43927 109 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 AQP8O94778 261 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 SOX30O94993 753 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 ANGPTL1O95841 491 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 THBDP07204 575 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 DDX5P17844 614 aaKnown RBP6.92□□□□□ -1.3
LSM5-202ENST00000409292 LOXP28300 417 aaPredicted RBP6.92□□□□□ -1.3
LSM5-202ENST00000409292 ACVR1BP36896 505 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 EIF1P41567 113 aaKnown RBP6.92□□□□□ -1.3
LSM5-202ENST00000409292 SERPINB9P50453 376 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 NCBP2P52298 156 aaKnown RBP eCLIP6.92□□□□□ -1.3
LSM5-202ENST00000409292 NUDT6P53370 316 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 GAS1P54826 345 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 CARD18P57730 90 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 GALNT1Q10472 559 aaPredicted RBP6.92□□□□□ -1.3
LSM5-202ENST00000409292 TRAF3Q13114 568 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 P2RY6Q15077 328 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 CTU2Q2VPK5 515 aaKnown RBP6.92□□□□□ -1.3
LSM5-202ENST00000409292 TECRLQ5HYJ1 363 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 SPDYAQ5MJ70 313 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 LIPNQ5VXI9 398 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 HBMQ6B0K9 141 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 CREG2Q8IUH2 290 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 CEP112Q8N8E3 955 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 MAPK1IP1LQ8NDC0 245 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 OR5M1Q8NGP8 315 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 OR10D3Q8NH80 312 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 CDC26Q8NHZ8 85 aa6.92□□□□□ -1.3
LSM5-202ENST00000409292 METTL6Q8TCB7 284 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms