RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 H3BMQ9 156 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 RPLP0P05388 317 aaKnown RBP17.55■□□□□ 0.4
USP39-202ENST00000409025 CT45A8P0DMV1 189 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 CT45A9P0DMV2 189 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 DRD5P21918 477 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 OMPP47874 163 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 MASP1P48740 699 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 RNF144AP50876 292 aaPredicted RBP17.55■□□□□ 0.4
USP39-202ENST00000409025 GP2P55259 537 aaKnown RBP17.55■□□□□ 0.4
USP39-202ENST00000409025 CCL7P80098 99 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 OR1Q1Q15612 314 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 CT45A2Q5DJT8 189 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 MBOAT2Q6ZWT7 520 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 TMPRSS9Q7Z410 1059 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 TMEM151BQ8IW70 566 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 EID2Q8N6I1 236 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 PTPMT1Q8WUK0 201 aaPredicted RBP17.55■□□□□ 0.4
USP39-202ENST00000409025 SENP5Q96HI0 755 aaPredicted RBP17.55■□□□□ 0.4
USP39-202ENST00000409025 FAM46AQ96IP4 442 aaKnown RBP17.55■□□□□ 0.4
USP39-202ENST00000409025 Q96MT0 163 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 COG8Q96MW5 612 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 ITPAQ9BY32 194 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 NAA50Q9GZZ1 169 aaKnown RBP17.55■□□□□ 0.4
USP39-202ENST00000409025 ACOT13Q9NPJ3 140 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.55■□□□□ 0.4
USP39-202ENST00000409025 C14orf105Q9NVL8 296 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 CBLCQ9ULV8 474 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 IGKV3D-11A0A0A0MRZ8 115 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 CLPSP04118 112 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 CDK1P06493 297 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 ANKRD34CP0C6C1 535 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 HTR2AP28223 471 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 HOXD12P35452 270 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 PSMD4P55036 377 aaKnown RBP17.55■□□□□ 0.4
USP39-202ENST00000409025 ACY1Q03154 408 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 GINS1Q14691 196 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 C1orf189Q5VU69 101 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 RABEPKQ7Z6M1 372 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 OR8J1Q8NGP2 316 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 CEP76Q8TAP6 659 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 TMEM255BQ8WV15 326 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 NAT6Q93015 286 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 TSLPQ969D9 159 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 IL4I1Q96RQ9 567 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 CNIH4Q9P003 139 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 SRPK3Q9UPE1 567 aa17.55■□□□□ 0.4
USP39-202ENST00000409025 A0A1W2PQM1 296 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 NTN1O95631 604 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 GIPRP48546 466 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 ZNF141Q15928 474 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 NNATQ16517 81 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 ZSWIM7Q19AV6 140 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 RASSF6Q6ZTQ3 369 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 MEX3DQ86XN8 651 aaKnown RBP17.54■□□□□ 0.4
USP39-202ENST00000409025 KIF18BQ86Y91 864 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 GRAMD2AQ8IUY3 354 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 NRMQ8IXM6 262 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 STX19Q8N4C7 294 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 BCORP1Q8N888 145 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 OR4D9Q8NGE8 314 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 TEX47Q8TBZ9 253 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 RAB2BQ8WUD1 216 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 ZFAND2BQ8WV99 257 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 ZNF559Q9BR84 538 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 SLC7A5P2Q9GIP4 190 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 GPR83Q9NYM4 423 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 CLCA3PQ9Y6N3 262 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 NUP210LQ5VU65 1888 aa17.54■□□□□ 0.4
USP39-202ENST00000409025 EFCAB10A6NFE3 127 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 A8MUA0 341 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 FPR3P25089 353 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 STAT5AP42229 794 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 SMSP52788 366 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 CDK5Q00535 292 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 RHAGQ02094 409 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 SYT6Q5T7P8 510 aaPredicted RBP17.53■□□□□ 0.4
USP39-202ENST00000409025 ARHGAP22Q7Z5H3 698 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 IQCF1Q8N6M8 205 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 B3GNT7Q8NFL0 401 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 CNOT9Q92600 299 aaKnown RBP17.53■□□□□ 0.4
USP39-202ENST00000409025 FCGR1BQ92637 280 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 CLIP3Q96DZ5 547 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 NECAB3Q96P71 396 aaPredicted RBP17.53■□□□□ 0.4
USP39-202ENST00000409025 LRRN3Q9H3W5 708 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 SYNDIG1Q9H7V2 258 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 TMEM27Q9HBJ8 222 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 SLC25A19Q9HC21 320 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 MKKSQ9NPJ1 570 aaPredicted RBP17.53■□□□□ 0.4
USP39-202ENST00000409025 TVP23BQ9NYZ1 205 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 ADAMTS9Q9P2N4 1935 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 BCAS1O75363 584 aaPredicted RBP17.53■□□□□ 0.4
USP39-202ENST00000409025 ATE1O95260 518 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 ATP12AP54707 1039 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 ELAVL1Q15717 326 aaKnown RBP17.53■□□□□ 0.4
USP39-202ENST00000409025 VWA2Q5GFL6 755 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 TMEM201Q5SNT2 666 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 TCEANCQ8N8B7 351 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 SLC46A1Q96NT5 459 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 PRSS27Q9BQR3 290 aa17.53■□□□□ 0.4
USP39-202ENST00000409025 FUNDC2Q9BWH2 189 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms