RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 NME6O75414 186 aaPredicted RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 ERLIN1O75477 346 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 KCNK2O95069 426 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 OXSR1O95747 527 aaPredicted RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 AGR2O95994 175 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 HMGN2P05204 90 aaKnown RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 EPXP11678 715 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 DNASE1P24855 282 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 ELK4P28324 431 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 MAP3K8P41279 467 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 ETV4P43268 484 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 CCT3P49368 545 aaKnown RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 STARP49675 285 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 CLNS1AP54105 237 aaKnown RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 SUMO3P55854 103 aaPredicted RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 WNT3P56703 355 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 ABCE1P61221 599 aaKnown RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 EMX2Q04743 252 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 ZNF844Q08AG5 666 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 DAZAP2Q15038 168 aaPredicted RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 SGCBQ16585 318 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 PRSS53Q2L4Q9 553 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 CEP85LQ5SZL2 805 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 SPNS3Q6ZMD2 512 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 MARCH3Q86UD3 253 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 METTL25Q8N6Q8 603 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 SLC16A11Q8NCK7 471 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 CHDHQ8NE62 594 aaPredicted RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 OIT3Q8WWZ8 545 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 PIK3R3Q92569 461 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 COQ8BQ96D53 544 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 FAM120BQ96EK7 910 aaKnown RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 PGM2Q96G03 612 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 DACH2Q96NX9 599 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 SLC39A3Q9BRY0 314 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 C1orf50Q9BV19 199 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 DUSP26Q9BV47 211 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 PARD6BQ9BYG5 372 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 CENPHQ9H3R5 247 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 RASSF1Q9NS23 344 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 MED11Q9P086 117 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 RAB21Q9UL25 225 aa8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 MCTS1Q9ULC4 181 aaKnown RBP8.21□□□□□ -1.1
SNORD88A-201ENST00000408314 PDZD2O15018 2839 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 A0A1W2PNV4 684 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 GJE1A6NN92 205 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 SYNGR4O95473 234 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 PABPC4LP0CB38 370 aaKnown RBP8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 ACP2P11117 423 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 TCEA1P23193 301 aaKnown RBP8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 CPOXP36551 454 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 RPL14P50914 215 aaKnown RBP8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 CLDN8P56748 225 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 B3GALT5-AS1P59052 145 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 KRTAP10-9P60411 292 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 LASP1Q14847 261 aaKnown RBP8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 PTGR1Q14914 329 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 CHI3L2Q15782 390 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 DUSP5Q16690 384 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 ANXA8L1Q5VT79 327 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 HHATQ5VTY9 493 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 GTF2IRD2BQ6EKJ0 949 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 FIGNL1Q6PIW4 674 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 POMZP3Q6PJE2 187 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 CAMKMTQ7Z624 323 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 GTF2IRD2Q86UP8 949 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 GCNT2Q8N0V5 402 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 GTPBP8Q8N3Z3 284 aaPredicted RBP8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 CNEP1R1Q8N9A8 125 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 OR7A2PQ8NGA2 310 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 B4GALNT2Q8NHY0 566 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 FBXO30Q8TB52 745 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 FAM110BQ8TC76 370 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 SMPDL3BQ92485 455 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 GIMAP5Q96F15 307 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 REXO5Q96IC2 774 aaKnown RBP8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 PINK1Q9BXM7 581 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 PRRG4Q9BZD6 226 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 DPY30Q9C005 99 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 KCNK9Q9NPC2 374 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 TIGARQ9NQ88 270 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 GLRX2Q9NS18 164 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 GALNT8Q9NY28 637 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 ELOVL5Q9NYP7 299 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 ZDHHC2Q9UIJ5 367 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 VDAC3Q9Y277 283 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 EMC9Q9Y3B6 208 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 ZNF337Q9Y3M9 751 aa8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 V9GYY5 206 aaPredicted RBP8.2□□□□□ -1.1
SNORD88A-201ENST00000408314 SPG11Q96JI7 2443 aa8.19□□□□□ -1.1
SNORD88A-201ENST00000408314 WDR91A4D1P6 747 aa8.19□□□□□ -1.1
SNORD88A-201ENST00000408314 SH3D21A4FU49 640 aa8.19□□□□□ -1.1
SNORD88A-201ENST00000408314 KDM4EB2RXH2 506 aaPredicted RBP8.19□□□□□ -1.1
SNORD88A-201ENST00000408314 RNASET2O00584 256 aaKnown RBP8.19□□□□□ -1.1
SNORD88A-201ENST00000408314 EIF1AYO14602 144 aaKnown RBP8.19□□□□□ -1.1
SNORD88A-201ENST00000408314 SMNDC1O75940 238 aaKnown RBP eCLIP8.19□□□□□ -1.1not detected■■■■□ 20.2
SNORD88A-201ENST00000408314 NUDT14O95848 222 aa8.19□□□□□ -1.1
SNORD88A-201ENST00000408314 C6orf47O95873 294 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms