RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 DNAJA3Q96EY1 480 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 SH3YL1Q96HL8 342 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 C8orf76Q96K31 380 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 AGAP4Q96P64 663 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 TGM7Q96PF1 710 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 RIT2Q99578 217 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 HSD17B14Q9BPX1 270 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 ADGRL4Q9HBW9 690 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 RAB18Q9NP72 206 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 UFSP2Q9NUQ7 469 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 MLXQ9UH92 298 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 RARRES3Q9UL19 164 aa4.01□□□□□ -1.77
HMGB1P13-201ENST00000406019 GRIN2DO15399 1336 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 TRGV8A0A0C4DH27 118 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 H0YC42 278 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF264O43296 627 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 PPIHO43447 177 aaKnown RBP4□□□□□ -1.77
HMGB1P13-201ENST00000406019 STX11O75558 287 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 SMC2O95347 1197 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 STAMBPO95630 424 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 JCHAINP01591 159 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 HCKP08631 526 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF883P0CG24 379 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 PGCP20142 388 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 LAP3P28838 519 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 MAGEA5P43359 124 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 ATP5OP48047 213 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 PRELPP51888 382 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 SLC7A2P52569 658 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 ACTR3P61158 418 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 RPL23AP62750 156 aaKnown RBP4□□□□□ -1.77
HMGB1P13-201ENST00000406019 IRX1P78414 480 aaPredicted RBP4□□□□□ -1.77
HMGB1P13-201ENST00000406019 LY6DQ14210 128 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 KCTD21Q4G0X4 260 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 SMUG1Q53HV7 270 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 C10orf120Q5SQS8 335 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 CCDC122Q5T0U0 273 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 SEL1L2Q5TEA6 688 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 Q6ZPB1 254 aaPredicted RBP4□□□□□ -1.77
HMGB1P13-201ENST00000406019 CCDC80Q76M96 950 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 CENPQQ7L2Z9 268 aaPredicted RBP4□□□□□ -1.77
HMGB1P13-201ENST00000406019 KIAA1328Q86T90 577 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 SLC22A9Q8IVM8 553 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 UBQLNLQ8IYU4 475 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 SLC38A6Q8IZM9 456 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 KRT222Q8N1A0 295 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 CLDN19Q8N6F1 224 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZNF614Q8N883 585 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 AQP11Q8NBQ7 271 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 PRSS33Q8NF86 280 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 CCDC148Q8NFR7 591 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 OR6C4Q8NGE1 309 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 OR5D13Q8NGL4 314 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 OR2T6Q8NHC8 308 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 FLVCR1-AS1Q8TAF5 88 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 MOCOSQ96EN8 888 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 TPD52L3Q96J77 140 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 PIWIL1Q96J94 861 aaKnown RBP4□□□□□ -1.77
HMGB1P13-201ENST00000406019 C7orf34Q96L11 122 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 NPAS2Q99743 824 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 SH3GL1Q99961 368 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 BARHL1Q9BZE3 327 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 GLT8D2Q9H1C3 349 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 POLR3FQ9H1D9 316 aaPredicted RBP4□□□□□ -1.77
HMGB1P13-201ENST00000406019 PNNQ9H307 717 aaKnown RBP4□□□□□ -1.77
HMGB1P13-201ENST00000406019 VPS37BQ9H9H4 285 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 BARHL2Q9NY43 387 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 RPH3ALQ9UNE2 315 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 GMPPBQ9Y5P6 360 aa4□□□□□ -1.77
HMGB1P13-201ENST00000406019 TRBV7-9A0A0J9YWB2 115 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 FAM240BA0A1B0GVZ2 78 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 OR7A17O14581 309 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 LCMT2O60294 686 aaKnown RBP3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 FCMRO60667 390 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 SORBS2O94875 1100 aaKnown RBP3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 DUS4LO95620 317 aaKnown RBP3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 WNT2P09544 360 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 PCMT1P22061 227 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 IGFBP5P24593 272 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 RPL4P36578 427 aaKnown RBP3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 BDKRB1P46663 353 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 NDUFV3P56181 108 aaKnown RBP3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 NTHL1P78549 312 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 NCBP1Q09161 790 aaKnown RBP3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 CUL2Q13617 745 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 MESDQ14696 234 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 FASTKD3Q14CZ7 662 aaKnown RBP3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 PPP1R7Q15435 360 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 MS4A18Q3C1V0 323 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZFP69Q49AA0 526 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 PHYHD1Q5SRE7 291 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 ZSCAN25Q6NSZ9 544 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 APOOLQ6UXV4 268 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 GCNT7Q6ZNI0 430 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 NLRP9Q7RTR0 991 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 C16orf62Q7Z3J2 963 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 TMEM123Q8N131 208 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 PDCL2Q8N4E4 241 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 OR52K2Q8NGK3 314 aa3.99□□□□□ -1.77
HMGB1P13-201ENST00000406019 OR4D5Q8NGN0 318 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms