RNA–Protein interactions for RNA: ENST00000401394.5

CTCF-202, Transcript of CCCTC-binding factor, humanhuman

TSL 1 (best) BASIC

Gene CTCF, Length 2,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-202ENST00000401394 ZNF81P51508 661 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 CSNK1G2P78368 415 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 ID2Q02363 134 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 SLC36A2Q495M3 483 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 PLEKHM3Q6ZWE6 761 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 SSX6Q7RTT6 188 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 GDF7Q7Z4P5 450 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 CEACAM19Q7Z692 300 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 SIAH3Q8IW03 269 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 OR2L2Q8NH16 312 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 GNPDA2Q8TDQ7 276 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 RGMAQ96B86 450 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 CHIAQ9BZP6 476 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 TAS2R7Q9NYW3 318 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 CACNG2Q9Y698 323 aa19.57■□□□□ 0.72
CTCF-202ENST00000401394 A0A087WV48 116 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 MAN2B1O00754 1011 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 RFPL3O75679 317 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 CCR8P51685 355 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 RGS8P57771 180 aaPredicted RBP19.56■□□□□ 0.72
CTCF-202ENST00000401394 OR12D2P58182 307 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 PGGHGQ32M88 737 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 FAM46CQ5VWP2 391 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 THAP4Q8WY91 577 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 HYLS1Q96M11 299 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 MCHR1Q99705 422 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 GHITMQ9H3K2 345 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 AUNIPQ9H7T9 357 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 TEX13CA0A0J9YWL9 993 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 J3QLW9 94 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 CHST10O43529 356 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 ZNF19P17023 458 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 BCL6P41182 706 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 SOX9P48436 509 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 EPHA5P54756 1037 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 ST3GAL2Q16842 350 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 LGALSLQ3ZCW2 172 aaPredicted RBP19.56■□□□□ 0.72
CTCF-202ENST00000401394 SFRP4Q6FHJ7 346 aaPredicted RBP19.56■□□□□ 0.72
CTCF-202ENST00000401394 THSD4Q6ZMP0 1018 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 CXXC5Q7LFL8 322 aaKnown RBP19.56■□□□□ 0.72
CTCF-202ENST00000401394 TRMT10AQ8TBZ6 339 aaKnown RBP19.56■□□□□ 0.72
CTCF-202ENST00000401394 UBE2E3Q969T4 207 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 MENTQ9BUN1 341 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 UBQLN3Q9H347 655 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 TMEM74BQ9NUR3 256 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 FBXO34Q9NWN3 711 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 SCML1Q9UN30 329 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 LRIT2A6NDA9 550 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 MAPK9P45984 424 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 FAAP20Q6NZ36 180 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 FAM111BQ6SJ93 734 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 OR5M3Q8NGP4 307 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 CREB3L1Q96BA8 519 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 DHRS9Q9BPW9 319 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 ZCCHC2Q9C0B9 1178 aaKnown RBP19.56■□□□□ 0.72
CTCF-202ENST00000401394 H2AFY2Q9P0M6 372 aaPredicted RBP19.56■□□□□ 0.72
CTCF-202ENST00000401394 TMEM5Q9Y2B1 443 aa19.56■□□□□ 0.72
CTCF-202ENST00000401394 A0A0A6YYD5 115 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 AIFM1O95831 613 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 IL9P15248 144 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 AHCYP23526 432 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 SIM1P81133 766 aaPredicted RBP19.55■□□□□ 0.72
CTCF-202ENST00000401394 TMEM255AQ5JRV8 349 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 SFXN4Q6P4A7 337 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 RASSF6Q6ZTQ3 369 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 ZNF767PQ75MW2 155 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 AMZ2Q86W34 360 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 LRRC17Q8N6Y2 441 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 RHBGQ9H310 441 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 CYSLTR2Q9NS75 346 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 SLC13A4Q9UKG4 626 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 ATP12AP54707 1039 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 TGM3Q08188 693 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 DUSP6Q16828 381 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 MZT2AQ6P582 158 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 SPRED2Q7Z698 418 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 KIAA0907Q7Z7F0 614 aaPredicted RBP19.55■□□□□ 0.72
CTCF-202ENST00000401394 TMEFF1Q8IYR6 380 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 PIGXQ8TBF5 258 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 GSDMCQ9BYG8 508 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 KCNK6Q9Y257 313 aa19.55■□□□□ 0.72
CTCF-202ENST00000401394 TP53BP1Q12888 1972 aaPredicted RBP19.54■□□□□ 0.72
CTCF-202ENST00000401394 ATXN8OSP0DMR3 200 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 ACRP10323 421 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 MAKP20794 623 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 SELENOPP49908 381 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 TRAM2Q15035 370 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 ZNF620Q6ZNG0 422 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 OR5J2Q8NH18 312 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 ANGPTL6Q8NI99 470 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 CAPN10Q9HC96 672 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 HMX1Q9NP08 348 aaPredicted RBP19.54■□□□□ 0.72
CTCF-202ENST00000401394 ZMIZ1Q9ULJ6 1067 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 CXCL14O95715 111 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 PDGFAP04085 211 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 TCRBP04435 133 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 WNT1P04628 370 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 FCER2P06734 321 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 PKLRP30613 574 aa19.54■□□□□ 0.72
CTCF-202ENST00000401394 PITPNBP48739 271 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms